Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC103798.2-201ENST00000624292 632 ntBASIC5.9□□□□□ -1.47
SNED1Q8TER0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.9□□□□□ -1.47
SNED1Q8TER0 AC063952.1-203ENST00000634410 658 ntBASIC5.9□□□□□ -1.47
SNED1Q8TER0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SNED1Q8TER0 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
SNED1Q8TER0 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SNED1Q8TER0 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNED1Q8TER0 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SNED1Q8TER0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SNED1Q8TER0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SNED1Q8TER0 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNED1Q8TER0 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNED1Q8TER0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNED1Q8TER0 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SNED1Q8TER0 RPL21P108-201ENST00000413857 481 ntBASIC5.89□□□□□ -1.47
SNED1Q8TER0 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 CBX1P1-201ENST00000440184 427 ntBASIC5.89□□□□□ -1.47
SNED1Q8TER0 LDHBP3-201ENST00000514909 822 ntBASIC5.89□□□□□ -1.47
SNED1Q8TER0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.89□□□□□ -1.47
SNED1Q8TER0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 AP001781.1-201ENST00000530977 207 ntBASIC5.89□□□□□ -1.47
SNED1Q8TER0 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNED1Q8TER0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNED1Q8TER0 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
SNED1Q8TER0 AL360270.2-201ENST00000562952 5985 ntBASIC5.89□□□□□ -1.47
SNED1Q8TER0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 RBPJP2-201ENST00000618187 1444 ntBASIC5.88□□□□□ -1.47
SNED1Q8TER0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 RAD17P1-201ENST00000418130 2042 ntBASIC5.88□□□□□ -1.47
SNED1Q8TER0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNED1Q8TER0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNED1Q8TER0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNED1Q8TER0 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNED1Q8TER0 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNED1Q8TER0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNED1Q8TER0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNED1Q8TER0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 RAD23BP1-201ENST00000421404 1227 ntBASIC5.88□□□□□ -1.47
SNED1Q8TER0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 AC091180.1-201ENST00000462104 372 ntBASIC5.88□□□□□ -1.47
SNED1Q8TER0 RPL36AP41-201ENST00000493820 306 ntBASIC5.88□□□□□ -1.47
SNED1Q8TER0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 AC084783.1-201ENST00000565846 910 ntBASIC5.88□□□□□ -1.47
SNED1Q8TER0 AC018690.1-201ENST00000608144 626 ntBASIC5.88□□□□□ -1.47
SNED1Q8TER0 AL049794.2-201ENST00000616301 365 ntBASIC5.88□□□□□ -1.47
SNED1Q8TER0 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.88□□□□□ -1.47
SNED1Q8TER0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNED1Q8TER0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNED1Q8TER0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNED1Q8TER0 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNED1Q8TER0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNED1Q8TER0 ADAM24P-201ENST00000398655 2101 ntBASIC5.87□□□□□ -1.47
SNED1Q8TER0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNED1Q8TER0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 SNORA73.1-201ENST00000363107 205 ntBASIC5.87□□□□□ -1.47
SNED1Q8TER0 SNORA37-201ENST00000384504 129 ntBASIC5.87□□□□□ -1.47
SNED1Q8TER0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.87□□□□□ -1.47
SNED1Q8TER0 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 FHP1-201ENST00000442741 703 ntBASIC5.87□□□□□ -1.47
SNED1Q8TER0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.87□□□□□ -1.47
SNED1Q8TER0 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 DPPA3P2-201ENST00000553589 478 ntBASIC5.87□□□□□ -1.47
SNED1Q8TER0 NDUFB4P11-201ENST00000560510 395 ntBASIC5.87□□□□□ -1.47
SNED1Q8TER0 MIR3138-201ENST00000585238 82 ntBASIC5.87□□□□□ -1.47
SNED1Q8TER0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 AC012409.3-201ENST00000611343 981 ntBASIC5.87□□□□□ -1.47
SNED1Q8TER0 AC004232.3-201ENST00000622977 525 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms