Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC093719.1-202ENST00000392735 373 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 TMBIM7P-201ENST00000418074 855 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 TNPO1P1-201ENST00000423641 1138 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 GEMIN8P3-201ENST00000445417 720 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 RPL5P30-201ENST00000465511 891 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 RPSAP39-201ENST00000467439 883 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 AC022795.1-201ENST00000473808 480 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 RN7SL214P-201ENST00000487317 265 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 PSMA2P2-201ENST00000504319 686 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 BTG4P1-201ENST00000510421 183 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 AC116553.2-201ENST00000564203 463 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 MTND2P13-201ENST00000577438 1039 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 FO681491.1-202ENST00000623392 737 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 AC073592.6-201ENST00000624271 415 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 AC087565.3-202ENST00000642085 1603 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 AC092435.4-201ENST00000623012 4159 ntBASIC4.23□□□□□ -1.73
CCDC71LQ8N9Z2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AC074029.4-201ENST00000624796 1859 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AC090181.3-201ENST00000624777 1514 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 MAPK10-286ENST00000641208 8747 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 OR10J6P-201ENST00000289731 930 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AC011155.1-201ENST00000316512 456 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 RNA5SP319-201ENST00000362768 119 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 RNU6-819P-201ENST00000364116 107 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 SNORA2.3-201ENST00000383920 135 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 CXADRP1-201ENST00000398098 1095 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AP000580.1-201ENST00000404439 358 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 DSTNP5-201ENST00000427921 523 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 RPS20P1-201ENST00000434853 354 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 RPL7AP61-201ENST00000443410 636 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 MRPL48P1-201ENST00000445390 636 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 EIF4A1P11-201ENST00000451239 222 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 RN7SL612P-201ENST00000497704 295 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 RNU6-362P-201ENST00000516736 90 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 CYCSP40-201ENST00000575927 294 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AC079315.1-201ENST00000602952 623 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AC022387.2-201ENST00000604050 448 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 CXADRP3-202ENST00000617265 1100 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 AL359922.3-201ENST00000624779 1670 ntBASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC71LQ8N9Z2 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC71LQ8N9Z2 HSPD1P11-201ENST00000508643 1702 ntBASIC4.21□□□□□ -1.73
CCDC71LQ8N9Z2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC71LQ8N9Z2 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC71LQ8N9Z2 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC71LQ8N9Z2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms