Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
KRT78Q8N1N4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRT78Q8N1N4 AC046144.1-201ENST00000478559 1853 ntBASIC5.62□□□□□ -1.51
KRT78Q8N1N4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 MTCO1P56-201ENST00000401674 224 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 VN1R12P-201ENST00000403778 876 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 TTC39DP-201ENST00000416781 1688 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC114814.2-201ENST00000419195 485 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AL590399.2-201ENST00000427536 309 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 RPS26P30-201ENST00000443431 335 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 MEMO1P4-201ENST00000453590 386 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 FRG2FP-204ENST00000453982 852 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 Z83838.1-202ENST00000456225 839 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 MTND4LP2-201ENST00000502312 285 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC025458.1-201ENST00000506046 166 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 IGBP1P5-201ENST00000507524 1000 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC011411.1-201ENST00000509592 876 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 OR5H7P-201ENST00000514084 930 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 RNA5SP473-201ENST00000516402 125 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 RN7SKP287-201ENST00000516546 266 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 Y_RNA.717-201ENST00000517106 92 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC091078.2-201ENST00000557145 559 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 KYNUP3-201ENST00000574386 1341 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 VN1R88P-201ENST00000596787 292 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 FAM27E4-201ENST00000605259 342 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 NANOGP3-201ENST00000605855 286 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AL583856.2-201ENST00000606298 543 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AL355488.2-201ENST00000609909 2850 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC104446.1-201ENST00000613728 1321 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC024884.1-201ENST00000620583 399 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 OR1S1-201ENST00000624470 978 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC092608.3-201ENST00000625017 386 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC090897.3-201ENST00000636973 1157 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 OR11H2-202ENST00000641517 1085 ntBASIC5.61□□□□□ -1.51
KRT78Q8N1N4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRT78Q8N1N4 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 PEX12P1-201ENST00000400284 1048 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 RN7SKP97-201ENST00000410966 333 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 RPS3AP37-201ENST00000419176 745 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 HIGD1AP12-201ENST00000427832 281 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC073069.1-201ENST00000428657 441 ntBASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.6□□□□□ -1.51
KRT78Q8N1N4 AC126120.1-201ENST00000431082 470 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms