Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.71□□□□□ -1.65
H3F3CQ6NXT2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
H3F3CQ6NXT2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.71□□□□□ -1.65
H3F3CQ6NXT2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AL022322.2-201ENST00000624072 20397 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 CASC19-221ENST00000641309 1382 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 RNA5SP428-201ENST00000365129 132 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 Z97832.1-201ENST00000402490 328 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AL139128.1-201ENST00000413921 941 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 SUMO2P1-206ENST00000445436 284 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AL354714.3-201ENST00000447284 493 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 HSPE1P22-201ENST00000456856 327 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AC108161.1-201ENST00000461060 402 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 RPS3AP41-201ENST00000462701 778 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 RN7SL443P-201ENST00000464331 290 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 RPL7P16-201ENST00000479738 738 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AC005000.1-201ENST00000536192 288 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 NMNAT1P1-201ENST00000554095 876 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 EDDM3DP-201ENST00000554692 434 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AL390726.5-202ENST00000564800 256 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 MIR3934-201ENST00000579806 107 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AC105254.2-201ENST00000603636 436 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AP001642.1-201ENST00000624727 2117 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AC009950.2-201ENST00000636548 183 ntBASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
H3F3CQ6NXT2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AL353625.1-202ENST00000366273 571 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AP002530.1-201ENST00000405705 684 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC013470.3-201ENST00000420252 1194 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 MTCO1P51-201ENST00000427672 1060 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC006466.1-201ENST00000438721 289 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AL772161.1-201ENST00000439130 476 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 OR7E125P-201ENST00000443450 846 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC020779.1-201ENST00000478757 796 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC140172.1-201ENST00000502928 141 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 RNA5SP43-201ENST00000516559 110 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 CDH12P4-201ENST00000517835 295 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 CDH12P3-201ENST00000517935 295 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 CDH12P1-201ENST00000518435 295 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC084759.1-201ENST00000561168 290 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 MIR4480-201ENST00000582492 71 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 MEMO1P5-201ENST00000604810 406 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 AL731532.2-201ENST00000623542 1953 ntBASIC4.7□□□□□ -1.66
H3F3CQ6NXT2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms