Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.78□□□□□ -1.32
SOX4Q06945 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.78□□□□□ -1.32
SOX4Q06945 AL157831.2-201ENST00000564681 3095 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SOX4Q06945 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.78□□□□□ -1.32
SOX4Q06945 OR52B5P-204ENST00000641744 3467 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SOX4Q06945 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
SOX4Q06945 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 RNU6-707P-201ENST00000364647 95 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX4Q06945 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 AC007435.1-201ENST00000421086 415 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.78□□□□□ -1.32
SOX4Q06945 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX4Q06945 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX4Q06945 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 MTATP6P30-201ENST00000443540 664 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 HMGN1P2-201ENST00000445197 310 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 NFU1P2-201ENST00000448700 469 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 OR52I1-201ENST00000450052 1050 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX4Q06945 BZW1P1-201ENST00000454901 1240 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX4Q06945 HMGN1P10-201ENST00000474557 553 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 AC092989.1-201ENST00000481235 277 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX4Q06945 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX4Q06945 AC106800.3-201ENST00000511389 308 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX4Q06945 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX4Q06945 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.78□□□□□ -1.32
SOX4Q06945 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SOX4Q06945 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX4Q06945 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.78□□□□□ -1.32
SOX4Q06945 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.78□□□□□ -1.32
SOX4Q06945 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.78□□□□□ -1.32
SOX4Q06945 MIR4528-201ENST00000577763 90 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 AC090616.5-202ENST00000582111 297 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX4Q06945 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.78□□□□□ -1.32
SOX4Q06945 AP000238.1-201ENST00000608759 426 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 AC004948.1-201ENST00000609858 672 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.78□□□□□ -1.32
SOX4Q06945 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SOX4Q06945 LINC01739-205ENST00000641890 573 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SOX4Q06945 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SOX4Q06945 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.78□□□□□ -1.32
SOX4Q06945 AC027575.3-201ENST00000583058 2747 ntBASIC6.78□□□□□ -1.32
SOX4Q06945 AC092821.2-201ENST00000545710 2042 ntBASIC6.77□□□□□ -1.32
SOX4Q06945 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
SOX4Q06945 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.32
SOX4Q06945 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
SOX4Q06945 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.32
SOX4Q06945 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SOX4Q06945 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
SOX4Q06945 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.77□□□□□ -1.33
SOX4Q06945 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX4Q06945 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX4Q06945 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX4Q06945 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SOX4Q06945 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SOX4Q06945 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SOX4Q06945 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX4Q06945 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SOX4Q06945 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SOX4Q06945 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.77□□□□□ -1.33
SOX4Q06945 MIR142-201ENST00000384835 87 ntBASIC6.77□□□□□ -1.33
SOX4Q06945 MIR1282-201ENST00000408865 101 ntBASIC6.77□□□□□ -1.33
SOX4Q06945 RPS26P13-201ENST00000419030 330 ntBASIC6.77□□□□□ -1.33
SOX4Q06945 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.77□□□□□ -1.33
SOX4Q06945 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms