Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RNA5SP228-201ENST00000516232 133 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RNA5SP373-201ENST00000517271 95 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC018442.3-201ENST00000523025 183 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 GLRXP2-201ENST00000555594 321 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 NDUFB4P11-201ENST00000560510 395 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AGGF1P9-201ENST00000561884 913 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC079395.2-201ENST00000610982 737 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC109309.2-201ENST00000612597 332 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RNU6-368P-201ENST00000620928 107 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RNU6-538P-201ENST00000622329 107 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC018529.3-201ENST00000624212 2254 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 RNU6-178P-201ENST00000384631 104 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 LAP3P1-201ENST00000403648 294 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 RPL21P108-201ENST00000413857 481 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AC093655.2-201ENST00000425735 631 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 FABP7P2-201ENST00000429946 379 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 GEMIN8P3-201ENST00000445417 720 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 Z92846.1-201ENST00000456203 268 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 RN7SL443P-201ENST00000464331 290 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 RPL7P39-201ENST00000481157 744 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 RN7SL214P-201ENST00000487317 265 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AC005412.2-201ENST00000492004 341 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AC112184.1-201ENST00000505179 312 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 RPL23AP53-201ENST00000521854 457 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AC126177.5-201ENST00000549599 178 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 SNORD95-201ENST00000579879 68 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AC069307.1-201ENST00000602820 447 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AC015908.5-201ENST00000623289 343 ntBASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.84□□□□□ -1.79
HIST1H1AQ02539 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HIST1H1AQ02539 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
HIST1H1AQ02539 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms