Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SNORA73.1-201ENST00000363107 205 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
H3F3AP84243 AC005522.1-201ENST00000395416 346 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 AL021331.1-201ENST00000402817 582 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.43□□□□□ -1.7
H3F3AP84243 AF186996.5-201ENST00000418098 904 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 AC012519.1-201ENST00000424588 610 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 RPL7P11-201ENST00000437586 658 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.43□□□□□ -1.7
H3F3AP84243 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.43□□□□□ -1.7
H3F3AP84243 RN7SL515P-201ENST00000463999 297 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 RN7SL329P-201ENST00000467740 299 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.43□□□□□ -1.7
H3F3AP84243 AC090142.2-201ENST00000483263 416 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.43□□□□□ -1.7
H3F3AP84243 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.43□□□□□ -1.7
H3F3AP84243 AL671862.1-201ENST00000515851 349 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 AC026688.1-201ENST00000520639 1168 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 OR5AZ1P-201ENST00000527448 943 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.43□□□□□ -1.7
H3F3AP84243 AC008033.2-201ENST00000542626 177 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.43□□□□□ -1.7
H3F3AP84243 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
H3F3AP84243 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.43□□□□□ -1.7
H3F3AP84243 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
H3F3AP84243 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.43□□□□□ -1.7
H3F3AP84243 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.43□□□□□ -1.7
H3F3AP84243 AC087821.1-201ENST00000623639 567 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 AL353662.3-201ENST00000625131 237 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.43□□□□□ -1.7
H3F3AP84243 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
H3F3AP84243 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.43□□□□□ -1.7
H3F3AP84243 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.43□□□□□ -1.7
H3F3AP84243 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.43□□□□□ -1.7
H3F3AP84243 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
H3F3AP84243 AC092111.2-201ENST00000611627 1414 ntBASIC4.43□□□□□ -1.7
H3F3AP84243 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
H3F3AP84243 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
H3F3AP84243 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
H3F3AP84243 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
H3F3AP84243 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
H3F3AP84243 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
H3F3AP84243 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H3F3AP84243 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
H3F3AP84243 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
H3F3AP84243 RN7SKP104-201ENST00000362605 328 ntBASIC4.42□□□□□ -1.7
H3F3AP84243 RN7SKP95-201ENST00000362860 303 ntBASIC4.42□□□□□ -1.7
H3F3AP84243 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
H3F3AP84243 AL109941.1-201ENST00000401925 229 ntBASIC4.42□□□□□ -1.7
H3F3AP84243 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.42□□□□□ -1.7
H3F3AP84243 AC013429.2-201ENST00000418798 781 ntBASIC4.42□□□□□ -1.7
H3F3AP84243 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.42□□□□□ -1.7
H3F3AP84243 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.42□□□□□ -1.7
H3F3AP84243 SCAND3P1-201ENST00000439854 1060 ntBASIC4.42□□□□□ -1.7
H3F3AP84243 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.42□□□□□ -1.7
H3F3AP84243 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.42□□□□□ -1.7
H3F3AP84243 BTF3P6-201ENST00000448054 499 ntBASIC4.42□□□□□ -1.7
H3F3AP84243 TRY2P-201ENST00000448860 689 ntBASIC4.42□□□□□ -1.7
H3F3AP84243 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.42□□□□□ -1.7
H3F3AP84243 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
H3F3AP84243 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.42□□□□□ -1.7
H3F3AP84243 HMGB1P19-201ENST00000517578 577 ntBASIC4.42□□□□□ -1.7
H3F3AP84243 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.42□□□□□ -1.7
H3F3AP84243 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.42□□□□□ -1.7
H3F3AP84243 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.42□□□□□ -1.7
H3F3AP84243 AC044860.2-201ENST00000561005 179 ntBASIC4.42□□□□□ -1.7
H3F3AP84243 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.42□□□□□ -1.7
H3F3AP84243 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.42□□□□□ -1.7
H3F3AP84243 NPM1P45-201ENST00000583151 559 ntBASIC4.42□□□□□ -1.7
H3F3AP84243 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.42□□□□□ -1.7
H3F3AP84243 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.42□□□□□ -1.7
H3F3AP84243 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.42□□□□□ -1.7
H3F3AP84243 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.42□□□□□ -1.7
H3F3AP84243 MAPK10-320ENST00000641462 6696 ntBASIC4.42□□□□□ -1.7
H3F3AP84243 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.42□□□□□ -1.7
H3F3AP84243 AP000542.2-201ENST00000623199 6179 ntBASIC4.42□□□□□ -1.7
H3F3AP84243 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
H3F3AP84243 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.42□□□□□ -1.7
H3F3AP84243 STX3-208ENST00000641815 3236 ntBASIC4.42□□□□□ -1.7
H3F3AP84243 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.42□□□□□ -1.7
H3F3AP84243 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
H3F3AP84243 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.41□□□□□ -1.7
H3F3AP84243 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H3F3AP84243 INTS6P1-201ENST00000504674 2530 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
H3F3AP84243 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.41□□□□□ -1.7
H3F3AP84243 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
H3F3AP84243 RBPJP2-201ENST00000618187 1444 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.41□□□□□ -1.7
H3F3AP84243 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H3F3AP84243 RNA5SP123-201ENST00000363244 119 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.41□□□□□ -1.7
H3F3AP84243 UBBP2-201ENST00000376781 231 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
H3F3AP84243 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H3F3AP84243 RNA5SP345-201ENST00000410646 108 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 CHEK2P3-201ENST00000416118 248 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 AL034379.1-201ENST00000423216 253 ntBASIC4.41□□□□□ -1.7
H3F3AP84243 NPM1P22-201ENST00000427761 952 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms