Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPL21P7-201ENST00000557463 483 ntBASIC5.42□□□□□ -1.54
TPM4P67936 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TPM4P67936 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.42□□□□□ -1.54
TPM4P67936 AC244100.4-201ENST00000617747 388 ntBASIC5.42□□□□□ -1.54
TPM4P67936 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TPM4P67936 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TPM4P67936 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.42□□□□□ -1.54
TPM4P67936 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TPM4P67936 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.42□□□□□ -1.54
TPM4P67936 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TPM4P67936 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TPM4P67936 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TPM4P67936 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
TPM4P67936 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.42□□□□□ -1.54
TPM4P67936 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TPM4P67936 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TPM4P67936 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
TPM4P67936 AC008758.3-201ENST00000507003 1829 ntBASIC5.41□□□□□ -1.54
TPM4P67936 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TPM4P67936 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
TPM4P67936 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.41□□□□□ -1.54
TPM4P67936 RN7SKP104-201ENST00000362605 328 ntBASIC5.41□□□□□ -1.54
TPM4P67936 RNA5SP28-201ENST00000363841 119 ntBASIC5.41□□□□□ -1.54
TPM4P67936 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
TPM4P67936 VDAC1P9-201ENST00000412766 841 ntBASIC5.41□□□□□ -1.54
TPM4P67936 SEPT7P8-201ENST00000413308 775 ntBASIC5.41□□□□□ -1.54
TPM4P67936 RPL21P108-201ENST00000413857 481 ntBASIC5.41□□□□□ -1.54
TPM4P67936 DDX39BP1-205ENST00000422507 192 ntBASIC5.41□□□□□ -1.54
TPM4P67936 KNOP1P3-201ENST00000446933 426 ntBASIC5.41□□□□□ -1.54
TPM4P67936 NDUFA5P5-201ENST00000468361 342 ntBASIC5.41□□□□□ -1.54
TPM4P67936 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
TPM4P67936 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TPM4P67936 RPL7P39-201ENST00000481157 744 ntBASIC5.41□□□□□ -1.54
TPM4P67936 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.41□□□□□ -1.54
TPM4P67936 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.41□□□□□ -1.54
TPM4P67936 AL049779.2-201ENST00000553847 315 ntBASIC5.41□□□□□ -1.54
TPM4P67936 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.41□□□□□ -1.54
TPM4P67936 ATP5J2P6-201ENST00000565203 266 ntBASIC5.41□□□□□ -1.54
TPM4P67936 AC134669.1-201ENST00000581275 672 ntBASIC5.41□□□□□ -1.54
TPM4P67936 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.41□□□□□ -1.54
TPM4P67936 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.41□□□□□ -1.54
TPM4P67936 AC005377.1-201ENST00000605126 456 ntBASIC5.41□□□□□ -1.54
TPM4P67936 AC087821.1-201ENST00000623639 567 ntBASIC5.41□□□□□ -1.54
TPM4P67936 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TPM4P67936 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TPM4P67936 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.41□□□□□ -1.54
TPM4P67936 AC108751.5-201ENST00000492880 1336 ntBASIC5.41□□□□□ -1.54
TPM4P67936 CASC19-281ENST00000642118 1554 ntBASIC5.41□□□□□ -1.54
TPM4P67936 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TPM4P67936 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.41□□□□□ -1.54
TPM4P67936 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.41□□□□□ -1.54
TPM4P67936 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.41□□□□□ -1.54
TPM4P67936 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TPM4P67936 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TPM4P67936 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.41□□□□□ -1.54
TPM4P67936 AC011493.1-201ENST00000596753 1632 ntBASIC5.41□□□□□ -1.54
TPM4P67936 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TPM4P67936 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TPM4P67936 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TPM4P67936 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
TPM4P67936 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TPM4P67936 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TPM4P67936 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.4□□□□□ -1.54
TPM4P67936 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TPM4P67936 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
TPM4P67936 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TPM4P67936 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TPM4P67936 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.4□□□□□ -1.54
TPM4P67936 Z97832.1-201ENST00000402490 328 ntBASIC5.4□□□□□ -1.54
TPM4P67936 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.4□□□□□ -1.54
TPM4P67936 VN1R37P-201ENST00000419096 748 ntBASIC5.4□□□□□ -1.54
TPM4P67936 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.4□□□□□ -1.54
TPM4P67936 RPL7L1P9-201ENST00000431298 745 ntBASIC5.4□□□□□ -1.54
TPM4P67936 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.4□□□□□ -1.54
TPM4P67936 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.4□□□□□ -1.54
TPM4P67936 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.4□□□□□ -1.54
TPM4P67936 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TPM4P67936 AC104651.2-201ENST00000447549 528 ntBASIC5.4□□□□□ -1.54
TPM4P67936 AC007386.1-201ENST00000455212 582 ntBASIC5.4□□□□□ -1.54
TPM4P67936 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TPM4P67936 PFN1P8-201ENST00000497012 543 ntBASIC5.4□□□□□ -1.54
TPM4P67936 GLRXP2-201ENST00000555594 321 ntBASIC5.4□□□□□ -1.54
TPM4P67936 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.4□□□□□ -1.54
TPM4P67936 RPL26P30-202ENST00000602923 645 ntBASIC5.4□□□□□ -1.54
TPM4P67936 AC105254.2-201ENST00000603636 436 ntBASIC5.4□□□□□ -1.54
TPM4P67936 AC073575.2-201ENST00000614212 627 ntBASIC5.4□□□□□ -1.54
TPM4P67936 AC009237.17-201ENST00000618111 748 ntBASIC5.4□□□□□ -1.54
TPM4P67936 MIR6837-201ENST00000620884 64 ntBASIC5.4□□□□□ -1.54
TPM4P67936 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.4□□□□□ -1.54
TPM4P67936 AC127024.6-201ENST00000621598 424 ntBASIC5.4□□□□□ -1.54
TPM4P67936 AC140113.4-201ENST00000622087 222 ntBASIC5.4□□□□□ -1.54
TPM4P67936 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TPM4P67936 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.4□□□□□ -1.55
TPM4P67936 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TPM4P67936 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TPM4P67936 AL136164.3-201ENST00000624429 3978 ntBASIC5.4□□□□□ -1.55
TPM4P67936 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.4□□□□□ -1.55
TPM4P67936 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TPM4P67936 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TPM4P67936 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms