Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC100770.1-201ENST00000532310 322 ntBASIC3.3□□□□□ -1.88
RPL39P62891 AL049779.2-201ENST00000553847 315 ntBASIC3.3□□□□□ -1.88
RPL39P62891 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.3□□□□□ -1.88
RPL39P62891 MIR4271-201ENST00000582451 67 ntBASIC3.3□□□□□ -1.88
RPL39P62891 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.3□□□□□ -1.88
RPL39P62891 AL591926.8-201ENST00000616876 211 ntBASIC3.3□□□□□ -1.88
RPL39P62891 AL669942.2-201ENST00000620352 697 ntBASIC3.3□□□□□ -1.88
RPL39P62891 AL353662.3-201ENST00000625131 237 ntBASIC3.3□□□□□ -1.88
RPL39P62891 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.3□□□□□ -1.88
RPL39P62891 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.3□□□□□ -1.88
RPL39P62891 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC3.3□□□□□ -1.88
RPL39P62891 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.3□□□□□ -1.88
RPL39P62891 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RPL39P62891 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.3□□□□□ -1.88
RPL39P62891 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
RPL39P62891 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPL39P62891 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
RPL39P62891 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC3.3□□□□□ -1.88
RPL39P62891 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC3.29□□□□□ -1.88
RPL39P62891 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RPL39P62891 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPL39P62891 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPL39P62891 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPL39P62891 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.29□□□□□ -1.88
RPL39P62891 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPL39P62891 MAPK10-304ENST00000641341 3984 ntBASIC3.29□□□□□ -1.88
RPL39P62891 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RPL39P62891 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RPL39P62891 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RPL39P62891 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RPL39P62891 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RPL39P62891 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPL39P62891 RNA5SP183-201ENST00000362452 119 ntBASIC3.29□□□□□ -1.88
RPL39P62891 SNORA70-201ENST00000384436 135 ntBASIC3.29□□□□□ -1.88
RPL39P62891 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.29□□□□□ -1.88
RPL39P62891 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.29□□□□□ -1.88
RPL39P62891 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPL39P62891 LINC00993-201ENST00000420453 540 ntBASIC3.29□□□□□ -1.88
RPL39P62891 GTF2IP2-201ENST00000424290 697 ntBASIC3.29□□□□□ -1.88
RPL39P62891 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC3.29□□□□□ -1.88
RPL39P62891 RPL21P43-201ENST00000425440 472 ntBASIC3.29□□□□□ -1.88
RPL39P62891 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.29□□□□□ -1.88
RPL39P62891 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.29□□□□□ -1.88
RPL39P62891 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPL39P62891 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.29□□□□□ -1.88
RPL39P62891 EIF4E2P2-201ENST00000492033 736 ntBASIC3.29□□□□□ -1.88
RPL39P62891 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.29□□□□□ -1.88
RPL39P62891 RNA5SP446-201ENST00000515955 82 ntBASIC3.29□□□□□ -1.88
RPL39P62891 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.29□□□□□ -1.88
RPL39P62891 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
RPL39P62891 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.29□□□□□ -1.88
RPL39P62891 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.29□□□□□ -1.88
RPL39P62891 MIR744-201ENST00000578242 98 ntBASIC3.29□□□□□ -1.88
RPL39P62891 AC005726.4-201ENST00000582858 458 ntBASIC3.29□□□□□ -1.88
RPL39P62891 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.29□□□□□ -1.88
RPL39P62891 AC008966.2-201ENST00000606157 453 ntBASIC3.29□□□□□ -1.88
RPL39P62891 AL627230.1-201ENST00000613077 211 ntBASIC3.29□□□□□ -1.88
RPL39P62891 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.29□□□□□ -1.88
RPL39P62891 AC127024.6-201ENST00000621598 424 ntBASIC3.29□□□□□ -1.88
RPL39P62891 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RPL39P62891 KARSP1-201ENST00000451871 1752 ntBASIC3.29□□□□□ -1.88
RPL39P62891 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPL39P62891 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.29□□□□□ -1.88
RPL39P62891 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
RPL39P62891 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.29□□□□□ -1.88
RPL39P62891 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
RPL39P62891 SMG1P6-201ENST00000532337 2930 ntBASIC3.29□□□□□ -1.88
RPL39P62891 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPL39P62891 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RPL39P62891 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.29□□□□□ -1.88
RPL39P62891 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPL39P62891 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RPL39P62891 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
RPL39P62891 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
RPL39P62891 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
RPL39P62891 AC007342.5-201ENST00000571340 2142 ntBASIC3.28□□□□□ -1.88
RPL39P62891 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.28□□□□□ -1.88
RPL39P62891 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
RPL39P62891 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RPL39P62891 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RPL39P62891 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RPL39P62891 RNU1-108P-201ENST00000362556 161 ntBASIC3.28□□□□□ -1.88
RPL39P62891 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
RPL39P62891 RNU1-82P-201ENST00000390851 165 ntBASIC3.28□□□□□ -1.88
RPL39P62891 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.28□□□□□ -1.88
RPL39P62891 RN7SKP167-201ENST00000411047 285 ntBASIC3.28□□□□□ -1.88
RPL39P62891 EIF4EP1-201ENST00000422311 642 ntBASIC3.28□□□□□ -1.88
RPL39P62891 NPM1P22-201ENST00000427761 952 ntBASIC3.28□□□□□ -1.88
RPL39P62891 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC3.28□□□□□ -1.88
RPL39P62891 RPL21P91-201ENST00000429231 479 ntBASIC3.28□□□□□ -1.88
RPL39P62891 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.28□□□□□ -1.88
RPL39P62891 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.28□□□□□ -1.88
RPL39P62891 RHOT1P3-201ENST00000436571 331 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms