Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS2P54868 OR5M12P-201ENST00000423388 929 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 RPEP3-201ENST00000425462 676 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 AL732292.1-201ENST00000426692 226 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 RSL24D1P6-201ENST00000426934 401 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 BX276092.6-201ENST00000430476 250 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS2P54868 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 AC073052.1-201ENST00000440417 714 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS2P54868 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCS2P54868 BX276092.8-201ENST00000455722 250 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 MTND2P28-201ENST00000457540 1044 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS2P54868 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS2P54868 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS2P54868 AC021733.2-201ENST00000518830 497 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 MTCO1P15-201ENST00000529569 1526 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS2P54868 RN7SL802P-201ENST00000577858 299 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS2P54868 AC073091.2-201ENST00000603205 907 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 AL139041.1-201ENST00000605480 610 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 AC006338.2-201ENST00000616864 791 ntBASIC5.61□□□□□ -1.51
HMGCS2P54868 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS2P54868 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS2P54868 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
HMGCS2P54868 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HMGCS2P54868 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCS2P54868 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS2P54868 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS2P54868 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS2P54868 AL442639.1-201ENST00000625030 1899 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGCS2P54868 AC123912.3-201ENST00000600907 1367 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HMGCS2P54868 RNA5SP453-201ENST00000362503 119 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 ELOCP19-201ENST00000411919 318 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 AL645608.4-201ENST00000423619 154 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGCS2P54868 AL121578.1-201ENST00000428051 892 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGCS2P54868 EIF2S2P2-201ENST00000447161 982 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 RPL10P17-201ENST00000453852 316 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 AC026688.1-201ENST00000520639 1168 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 TOMM20P2-201ENST00000540082 421 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGCS2P54868 AC105036.1-201ENST00000566222 271 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 AP001542.1-201ENST00000591314 200 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 AL121932.1-201ENST00000605542 214 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.6□□□□□ -1.51
HMGCS2P54868 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGCS2P54868 OR52H1-202ENST00000641796 1061 ntBASIC5.6□□□□□ -1.51
HMGCS2P54868 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HMGCS2P54868 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.6□□□□□ -1.51
HMGCS2P54868 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGCS2P54868 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGCS2P54868 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS2P54868 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS2P54868 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGCS2P54868 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS2P54868 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGCS2P54868 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS2P54868 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS2P54868 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS2P54868 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS2P54868 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGCS2P54868 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
HMGCS2P54868 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGCS2P54868 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HMGCS2P54868 RNA5SP447-201ENST00000363749 119 ntBASIC5.59□□□□□ -1.51
HMGCS2P54868 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS2P54868 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGCS2P54868 GPS2P1-201ENST00000411761 986 ntBASIC5.59□□□□□ -1.51
HMGCS2P54868 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGCS2P54868 MRPS21P2-201ENST00000424704 264 ntBASIC5.59□□□□□ -1.51
HMGCS2P54868 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGCS2P54868 AL161747.1-201ENST00000480068 358 ntBASIC5.59□□□□□ -1.51
HMGCS2P54868 AC083829.1-201ENST00000503756 657 ntBASIC5.59□□□□□ -1.51
HMGCS2P54868 RN7SKP122-201ENST00000515923 296 ntBASIC5.59□□□□□ -1.51
HMGCS2P54868 AP002981.1-201ENST00000517692 975 ntBASIC5.59□□□□□ -1.51
HMGCS2P54868 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS2P54868 MTCYBP13-201ENST00000578634 1093 ntBASIC5.59□□□□□ -1.51
HMGCS2P54868 MIR5699-201ENST00000578903 90 ntBASIC5.59□□□□□ -1.51
HMGCS2P54868 AP005119.2-201ENST00000579735 1105 ntBASIC5.59□□□□□ -1.51
HMGCS2P54868 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS2P54868 AL356218.2-201ENST00000605264 187 ntBASIC5.59□□□□□ -1.51
HMGCS2P54868 MLECP1-201ENST00000615893 709 ntBASIC5.59□□□□□ -1.51
HMGCS2P54868 MIR6830-201ENST00000636015 70 ntBASIC5.59□□□□□ -1.51
HMGCS2P54868 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS2P54868 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS2P54868 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGCS2P54868 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGCS2P54868 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HMGCS2P54868 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGCS2P54868 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
HMGCS2P54868 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HMGCS2P54868 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms