Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.22□□□□□ -1.57
TNFSF9P41273 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.22□□□□□ -1.57
TNFSF9P41273 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.22□□□□□ -1.57
TNFSF9P41273 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.22□□□□□ -1.57
TNFSF9P41273 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TNFSF9P41273 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TNFSF9P41273 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TNFSF9P41273 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TNFSF9P41273 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.22□□□□□ -1.57
TNFSF9P41273 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TNFSF9P41273 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.22□□□□□ -1.57
TNFSF9P41273 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
TNFSF9P41273 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.21□□□□□ -1.57
TNFSF9P41273 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TNFSF9P41273 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
TNFSF9P41273 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.21□□□□□ -1.58
TNFSF9P41273 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TNFSF9P41273 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TNFSF9P41273 RNU1-82P-201ENST00000390851 165 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.21□□□□□ -1.58
TNFSF9P41273 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.21□□□□□ -1.58
TNFSF9P41273 RGS17P1-201ENST00000423358 553 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 FABP7P1-201ENST00000424004 391 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 CEACAMP9-201ENST00000442990 513 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.21□□□□□ -1.58
TNFSF9P41273 RPS5P7-201ENST00000456664 608 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 GYG1P1-201ENST00000460864 698 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 RN7SL860P-201ENST00000473738 223 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 AC104971.1-201ENST00000495117 578 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 AC073358.1-201ENST00000505671 684 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 ENPP7P9-201ENST00000514456 627 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.21□□□□□ -1.58
TNFSF9P41273 Y_RNA.719-201ENST00000517156 106 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 BUD31P1-201ENST00000521828 359 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.21□□□□□ -1.58
TNFSF9P41273 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
TNFSF9P41273 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.21□□□□□ -1.58
TNFSF9P41273 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.21□□□□□ -1.58
TNFSF9P41273 MIR6853-201ENST00000619642 74 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.21□□□□□ -1.58
TNFSF9P41273 SMG1P6-201ENST00000532337 2930 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 AC104623.2-202ENST00000623477 4002 ntBASIC5.21□□□□□ -1.58
TNFSF9P41273 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TNFSF9P41273 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TNFSF9P41273 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
TNFSF9P41273 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.21□□□□□ -1.58
TNFSF9P41273 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF9P41273 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF9P41273 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF9P41273 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
TNFSF9P41273 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TNFSF9P41273 AC083837.1-201ENST00000565297 2994 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TNFSF9P41273 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF9P41273 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF9P41273 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF9P41273 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TNFSF9P41273 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFSF9P41273 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF9P41273 MRPS21P2-201ENST00000424704 264 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 CYCSP11-201ENST00000436426 315 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFSF9P41273 RNU7-157P-201ENST00000459600 66 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 SUMO2P4-201ENST00000504193 276 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFSF9P41273 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFSF9P41273 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF9P41273 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF9P41273 AC137768.1-201ENST00000549998 553 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.2□□□□□ -1.58
TNFSF9P41273 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFSF9P41273 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.2□□□□□ -1.58
TNFSF9P41273 MIR4330-201ENST00000579077 105 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 MIR4270-201ENST00000581799 70 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 AC098935.2-201ENST00000604222 466 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 AC012414.7-202ENST00000622705 1090 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.2□□□□□ -1.58
TNFSF9P41273 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF9P41273 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF9P41273 ICE2P1-201ENST00000512800 1849 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TNFSF9P41273 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 AL442639.1-201ENST00000625030 1899 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 AC012618.3-205ENST00000637896 1496 ntBASIC5.2□□□□□ -1.58
TNFSF9P41273 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.19□□□□□ -1.58
TNFSF9P41273 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.19□□□□□ -1.58
TNFSF9P41273 AL590240.1-201ENST00000334118 313 ntBASIC5.19□□□□□ -1.58
TNFSF9P41273 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TNFSF9P41273 AL807761.1-201ENST00000417622 171 ntBASIC5.19□□□□□ -1.58
TNFSF9P41273 AC019050.1-201ENST00000418508 492 ntBASIC5.19□□□□□ -1.58
TNFSF9P41273 AL451139.1-201ENST00000434718 346 ntBASIC5.19□□□□□ -1.58
TNFSF9P41273 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.19□□□□□ -1.58
TNFSF9P41273 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.19□□□□□ -1.58
TNFSF9P41273 AC006463.2-201ENST00000473326 348 ntBASIC5.19□□□□□ -1.58
TNFSF9P41273 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.19□□□□□ -1.58
TNFSF9P41273 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.19□□□□□ -1.58
TNFSF9P41273 RNU2-30P-201ENST00000516209 141 ntBASIC5.19□□□□□ -1.58
TNFSF9P41273 OR5M2P-201ENST00000529003 936 ntBASIC5.19□□□□□ -1.58
TNFSF9P41273 CYCSP40-201ENST00000575927 294 ntBASIC5.19□□□□□ -1.58
TNFSF9P41273 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms