Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.67□□□□□ -1.66
RFC3P40938 NDUFA5P8-201ENST00000449019 346 ntBASIC4.67□□□□□ -1.66
RFC3P40938 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.67□□□□□ -1.66
RFC3P40938 AP000859.1-201ENST00000525536 307 ntBASIC4.67□□□□□ -1.66
RFC3P40938 EIF4EP5-201ENST00000528228 640 ntBASIC4.67□□□□□ -1.66
RFC3P40938 AC130364.2-201ENST00000528639 604 ntBASIC4.67□□□□□ -1.66
RFC3P40938 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFC3P40938 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.67□□□□□ -1.66
RFC3P40938 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.67□□□□□ -1.66
RFC3P40938 AC138627.1-204ENST00000641894 765 ntBASIC4.67□□□□□ -1.66
RFC3P40938 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFC3P40938 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
RFC3P40938 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.67□□□□□ -1.66
RFC3P40938 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
RFC3P40938 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFC3P40938 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC3P40938 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC3P40938 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.67□□□□□ -1.66
RFC3P40938 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC3P40938 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFC3P40938 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RFC3P40938 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFC3P40938 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFC3P40938 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFC3P40938 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC3P40938 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFC3P40938 MUC2-202ENST00000613187 4845 ntBASIC4.66□□□□□ -1.66
RFC3P40938 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.66□□□□□ -1.66
RFC3P40938 RN7SKP153-201ENST00000365026 316 ntBASIC4.66□□□□□ -1.66
RFC3P40938 RNA5SP223-201ENST00000365174 120 ntBASIC4.66□□□□□ -1.66
RFC3P40938 AL353625.1-202ENST00000366273 571 ntBASIC4.66□□□□□ -1.66
RFC3P40938 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFC3P40938 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFC3P40938 RN7SKP216-201ENST00000411050 312 ntBASIC4.66□□□□□ -1.66
RFC3P40938 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.66□□□□□ -1.66
RFC3P40938 OR2AM1P-201ENST00000422137 422 ntBASIC4.66□□□□□ -1.66
RFC3P40938 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC3P40938 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.66□□□□□ -1.66
RFC3P40938 AL360081.1-201ENST00000428299 555 ntBASIC4.66□□□□□ -1.66
RFC3P40938 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.66□□□□□ -1.66
RFC3P40938 AL161722.2-201ENST00000434731 981 ntBASIC4.66□□□□□ -1.66
RFC3P40938 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.66□□□□□ -1.66
RFC3P40938 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.66□□□□□ -1.66
RFC3P40938 AC105233.1-201ENST00000498840 781 ntBASIC4.66□□□□□ -1.66
RFC3P40938 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC3P40938 AC010350.1-201ENST00000504908 231 ntBASIC4.66□□□□□ -1.66
RFC3P40938 BTG4P1-201ENST00000510421 183 ntBASIC4.66□□□□□ -1.66
RFC3P40938 HMGB1P19-201ENST00000517578 577 ntBASIC4.66□□□□□ -1.66
RFC3P40938 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC3P40938 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.66□□□□□ -1.66
RFC3P40938 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.66□□□□□ -1.66
RFC3P40938 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.66□□□□□ -1.66
RFC3P40938 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
RFC3P40938 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.66□□□□□ -1.66
RFC3P40938 AC105254.2-201ENST00000603636 436 ntBASIC4.66□□□□□ -1.66
RFC3P40938 AC087385.3-201ENST00000620477 187 ntBASIC4.66□□□□□ -1.66
RFC3P40938 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC3P40938 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC3P40938 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.66□□□□□ -1.66
RFC3P40938 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.66□□□□□ -1.66
RFC3P40938 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC3P40938 TTC39DP-201ENST00000416781 1688 ntBASIC4.66□□□□□ -1.66
RFC3P40938 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.66□□□□□ -1.66
RFC3P40938 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
RFC3P40938 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RFC3P40938 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFC3P40938 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFC3P40938 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFC3P40938 AL034370.1-201ENST00000397254 1590 ntBASIC4.65□□□□□ -1.66
RFC3P40938 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.65□□□□□ -1.66
RFC3P40938 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RFC3P40938 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
RFC3P40938 AC000123.3-201ENST00000624029 4975 ntBASIC4.65□□□□□ -1.66
RFC3P40938 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RFC3P40938 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
RFC3P40938 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFC3P40938 RN7SKP95-201ENST00000362860 303 ntBASIC4.65□□□□□ -1.67
RFC3P40938 RN7SKP115-201ENST00000363177 317 ntBASIC4.65□□□□□ -1.67
RFC3P40938 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFC3P40938 SNORA66-201ENST00000384792 133 ntBASIC4.65□□□□□ -1.67
RFC3P40938 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RFC3P40938 GAPDHP15-201ENST00000398586 975 ntBASIC4.65□□□□□ -1.67
RFC3P40938 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.65□□□□□ -1.67
RFC3P40938 CHEK2P3-201ENST00000416118 248 ntBASIC4.65□□□□□ -1.67
RFC3P40938 DDX39BP1-205ENST00000422507 192 ntBASIC4.65□□□□□ -1.67
RFC3P40938 AC017019.1-201ENST00000426129 261 ntBASIC4.65□□□□□ -1.67
RFC3P40938 AL049745.1-201ENST00000433953 286 ntBASIC4.65□□□□□ -1.67
RFC3P40938 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.65□□□□□ -1.67
RFC3P40938 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.65□□□□□ -1.67
RFC3P40938 AL591623.2-201ENST00000449978 222 ntBASIC4.65□□□□□ -1.67
RFC3P40938 AC245028.2-201ENST00000458673 253 ntBASIC4.65□□□□□ -1.67
RFC3P40938 MYL12BP2-201ENST00000503948 512 ntBASIC4.65□□□□□ -1.67
RFC3P40938 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.65□□□□□ -1.67
RFC3P40938 BTF3P13-201ENST00000513224 490 ntBASIC4.65□□□□□ -1.67
RFC3P40938 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.65□□□□□ -1.67
RFC3P40938 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.65□□□□□ -1.67
RFC3P40938 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.65□□□□□ -1.67
RFC3P40938 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.65□□□□□ -1.67
RFC3P40938 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.65□□□□□ -1.67
RFC3P40938 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms