Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AP001922.4-201ENST00000526967 290 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC13P31276 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HOXC13P31276 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC13P31276 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC13P31276 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXC13P31276 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC13P31276 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC13P31276 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC13P31276 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXC13P31276 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC13P31276 AC069307.1-201ENST00000602820 447 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC13P31276 AC084036.1-201ENST00000609190 508 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC13P31276 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AP003400.3-201ENST00000624904 346 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC13P31276 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC13P31276 AC119674.1-220ENST00000641502 1048 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC13P31276 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC13P31276 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
HOXC13P31276 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC13P31276 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC13P31276 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC13P31276 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HOXC13P31276 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC13P31276 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXC13P31276 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC13P31276 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC13P31276 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HOXC13P31276 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC13P31276 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
HOXC13P31276 RNU1-149P-201ENST00000390870 161 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC13P31276 AC092570.3-201ENST00000420113 693 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 NDUFA5P1-201ENST00000433858 341 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC13P31276 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC13P31276 AC016772.1-201ENST00000444170 1261 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 PTMAP3-201ENST00000447474 330 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXC13P31276 HIGD1AP8-201ENST00000453927 274 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 FTH1P2-201ENST00000466086 412 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 UBA52P3-201ENST00000491303 382 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 IGBP1P4-201ENST00000503202 879 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC13P31276 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC13P31276 RNA5SP373-201ENST00000517271 95 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC13P31276 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC13P31276 HMGB1P40-201ENST00000525121 540 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 YWHABP2-201ENST00000540201 713 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC13P31276 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXC13P31276 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC13P31276 DPRXP4-201ENST00000578053 568 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXC13P31276 AC068020.1-201ENST00000594215 661 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC13P31276 AC130352.1-201ENST00000602979 661 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 AC012557.1-201ENST00000607115 611 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC13P31276 MIR378J-201ENST00000611988 109 ntBASIC5.53□□□□□ -1.52
HOXC13P31276 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC13P31276 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC13P31276 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC13P31276 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HOXC13P31276 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC13P31276 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HOXC13P31276 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 OR55B1P-203ENST00000641518 2602 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXC13P31276 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC13P31276 RNU6-304P-201ENST00000364855 107 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 RNA5SP223-201ENST00000365174 120 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 AC083799.1-201ENST00000366451 910 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 SNORA67-201ENST00000384423 137 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
HOXC13P31276 AL590806.1-201ENST00000415818 853 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 AC093655.2-201ENST00000425735 631 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 AC124944.2-201ENST00000429866 1242 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 RPS20P1-201ENST00000434853 354 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC13P31276 RPL12P46-201ENST00000436610 195 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC13P31276 MTND6P18-201ENST00000439477 513 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 AC090804.1-201ENST00000448870 490 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 RPS3AP53-201ENST00000454716 778 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 AC079168.1-201ENST00000458741 345 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 AC058823.1-201ENST00000485315 474 ntBASIC5.52□□□□□ -1.53
HOXC13P31276 AC109462.1-201ENST00000491087 368 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms