Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SAP18P1-201ENST00000512058 390 ntBASIC5.65□□□□□ -1.51
COL4A5P29400 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.65□□□□□ -1.51
COL4A5P29400 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.65□□□□□ -1.51
COL4A5P29400 SNORA74C-1-201ENST00000580726 201 ntBASIC5.65□□□□□ -1.51
COL4A5P29400 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.65□□□□□ -1.51
COL4A5P29400 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.65□□□□□ -1.51
COL4A5P29400 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.65□□□□□ -1.51
COL4A5P29400 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.65□□□□□ -1.51
COL4A5P29400 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.65□□□□□ -1.51
COL4A5P29400 AC133552.1-201ENST00000569988 4007 ntBASIC5.64□□□□□ -1.51
COL4A5P29400 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL4A5P29400 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.64□□□□□ -1.51
COL4A5P29400 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A5P29400 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A5P29400 AC093671.1-201ENST00000624981 2929 ntBASIC5.64□□□□□ -1.51
COL4A5P29400 RN7SKP224-201ENST00000364140 325 ntBASIC5.64□□□□□ -1.51
COL4A5P29400 RAB9AP4-201ENST00000415230 609 ntBASIC5.64□□□□□ -1.51
COL4A5P29400 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.64□□□□□ -1.51
COL4A5P29400 RPL23AP93-201ENST00000440847 484 ntBASIC5.64□□□□□ -1.51
COL4A5P29400 Z95327.1-201ENST00000446082 482 ntBASIC5.64□□□□□ -1.51
COL4A5P29400 PRPF38AP1-201ENST00000451976 933 ntBASIC5.64□□□□□ -1.51
COL4A5P29400 snoU13.22-201ENST00000459428 104 ntBASIC5.64□□□□□ -1.51
COL4A5P29400 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.64□□□□□ -1.51
COL4A5P29400 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.64□□□□□ -1.51
COL4A5P29400 RN7SL176P-201ENST00000580352 264 ntBASIC5.64□□□□□ -1.51
COL4A5P29400 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.64□□□□□ -1.51
COL4A5P29400 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.64□□□□□ -1.51
COL4A5P29400 AC011447.7-201ENST00000624228 1590 ntBASIC5.64□□□□□ -1.51
COL4A5P29400 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL4A5P29400 ABCC13-202ENST00000463099 3842 ntBASIC5.64□□□□□ -1.51
COL4A5P29400 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
COL4A5P29400 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL4A5P29400 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
COL4A5P29400 AC073365.1-203ENST00000641055 1992 ntBASIC5.64□□□□□ -1.51
COL4A5P29400 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
COL4A5P29400 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A5P29400 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A5P29400 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
COL4A5P29400 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A5P29400 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A5P29400 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.63□□□□□ -1.51
COL4A5P29400 NDUFA5P1-201ENST00000433858 341 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A5P29400 RN7SL98P-201ENST00000462271 300 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 RN7SL542P-201ENST00000467147 294 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A5P29400 RNA5SP143-201ENST00000516936 115 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A5P29400 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A5P29400 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A5P29400 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
COL4A5P29400 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A5P29400 AC073137.1-201ENST00000605636 634 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A5P29400 MIR492-201ENST00000638676 116 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A5P29400 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A5P29400 AC090017.1-201ENST00000548612 1779 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A5P29400 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A5P29400 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A5P29400 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A5P29400 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A5P29400 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
COL4A5P29400 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.63□□□□□ -1.51
COL4A5P29400 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A5P29400 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A5P29400 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL4A5P29400 OR1F12-201ENST00000402365 945 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 AL022722.2-201ENST00000402519 180 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 RPL23AP26-201ENST00000412728 464 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.63□□□□□ -1.51
COL4A5P29400 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A5P29400 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 SCARNA10-201ENST00000459255 330 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.63□□□□□ -1.51
COL4A5P29400 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.63□□□□□ -1.51
COL4A5P29400 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.63□□□□□ -1.51
COL4A5P29400 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 AC006133.1-201ENST00000617106 264 ntBASIC5.63□□□□□ -1.51
COL4A5P29400 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
COL4A5P29400 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A5P29400 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL4A5P29400 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A5P29400 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A5P29400 ICE2P1-201ENST00000512800 1849 ntBASIC5.62□□□□□ -1.51
COL4A5P29400 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.62□□□□□ -1.51
COL4A5P29400 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A5P29400 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A5P29400 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
COL4A5P29400 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A5P29400 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL4A5P29400 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A5P29400 MIR372-201ENST00000362225 67 ntBASIC5.62□□□□□ -1.51
COL4A5P29400 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A5P29400 AC011933.1-201ENST00000413334 321 ntBASIC5.62□□□□□ -1.51
COL4A5P29400 AP001324.1-201ENST00000428553 399 ntBASIC5.62□□□□□ -1.51
COL4A5P29400 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.62□□□□□ -1.51
COL4A5P29400 AC116533.1-201ENST00000459748 321 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms