Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RN7SKP240-201ENST00000410583 375 ntBASIC7.38□□□□□ -1.23
VARSP26640 RNU2-47P-201ENST00000410649 186 ntBASIC7.38□□□□□ -1.23
VARSP26640 RN7SKP279-201ENST00000411383 298 ntBASIC7.38□□□□□ -1.23
VARSP26640 TMSB4XP6-201ENST00000415187 135 ntBASIC7.38□□□□□ -1.23
VARSP26640 PGAM1P3-201ENST00000420790 565 ntBASIC7.38□□□□□ -1.23
VARSP26640 BEND7P1-201ENST00000422058 457 ntBASIC7.38□□□□□ -1.23
VARSP26640 GAPDHP73-201ENST00000423411 1007 ntBASIC7.38□□□□□ -1.23
VARSP26640 TMSB4XP1-201ENST00000424567 135 ntBASIC7.38□□□□□ -1.23
VARSP26640 RPL5P34-201ENST00000426545 891 ntBASIC7.38□□□□□ -1.23
VARSP26640 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7.38□□□□□ -1.23
VARSP26640 RPSAP62-201ENST00000432596 833 ntBASIC7.38□□□□□ -1.23
VARSP26640 RPL21P110-201ENST00000433345 446 ntBASIC7.38□□□□□ -1.23
VARSP26640 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.38□□□□□ -1.23
VARSP26640 RPL17P49-201ENST00000443728 411 ntBASIC7.38□□□□□ -1.23
VARSP26640 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.38□□□□□ -1.23
VARSP26640 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC7.38□□□□□ -1.23
VARSP26640 AC093799.1-201ENST00000452411 499 ntBASIC7.38□□□□□ -1.23
VARSP26640 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.38□□□□□ -1.23
VARSP26640 RNU6-1208P-201ENST00000459588 107 ntBASIC7.38□□□□□ -1.23
VARSP26640 AC096922.1-201ENST00000461635 651 ntBASIC7.38□□□□□ -1.23
VARSP26640 AC017015.1-201ENST00000477387 286 ntBASIC7.38□□□□□ -1.23
VARSP26640 AC079080.1-201ENST00000479841 822 ntBASIC7.38□□□□□ -1.23
VARSP26640 AC093325.1-201ENST00000508378 326 ntBASIC7.38□□□□□ -1.23
VARSP26640 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.38□□□□□ -1.23
VARSP26640 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC7.38□□□□□ -1.23
VARSP26640 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
VARSP26640 SCARNA20.1-201ENST00000516009 138 ntBASIC7.38□□□□□ -1.23
VARSP26640 RNU6-583P-201ENST00000516012 92 ntBASIC7.38□□□□□ -1.23
VARSP26640 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.38□□□□□ -1.23
VARSP26640 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC7.38□□□□□ -1.23
VARSP26640 AP004833.3-201ENST00000531893 322 ntBASIC7.38□□□□□ -1.23
VARSP26640 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC7.38□□□□□ -1.23
VARSP26640 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 CHEK2P2-201ENST00000554701 672 ntBASIC7.38□□□□□ -1.23
VARSP26640 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC7.38□□□□□ -1.23
VARSP26640 AC009117.1-201ENST00000563948 554 ntBASIC7.38□□□□□ -1.23
VARSP26640 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.38□□□□□ -1.23
VARSP26640 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.38□□□□□ -1.23
VARSP26640 MIR3137-201ENST00000577367 75 ntBASIC7.38□□□□□ -1.23
VARSP26640 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.38□□□□□ -1.23
VARSP26640 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.38□□□□□ -1.23
VARSP26640 MIR4742-201ENST00000581069 85 ntBASIC7.38□□□□□ -1.23
VARSP26640 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.38□□□□□ -1.23
VARSP26640 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 AL161891.1-201ENST00000621575 4636 ntBASIC7.38□□□□□ -1.23
VARSP26640 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.38□□□□□ -1.23
VARSP26640 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.38□□□□□ -1.23
VARSP26640 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
VARSP26640 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
VARSP26640 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.38□□□□□ -1.23
VARSP26640 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARSP26640 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC7.37□□□□□ -1.23
VARSP26640 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
VARSP26640 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.37□□□□□ -1.23
VARSP26640 AC092821.3-202ENST00000641304 2767 ntBASIC7.37□□□□□ -1.23
VARSP26640 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
VARSP26640 MTCO1P12-201ENST00000414273 1543 ntBASIC7.37□□□□□ -1.23
VARSP26640 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARSP26640 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VARSP26640 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.37□□□□□ -1.23
VARSP26640 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.37□□□□□ -1.23
VARSP26640 MARK2P10-201ENST00000454959 1437 ntBASIC7.37□□□□□ -1.23
VARSP26640 AL133243.4-201ENST00000623116 3109 ntBASIC7.37□□□□□ -1.23
VARSP26640 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
VARSP26640 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VARSP26640 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.37□□□□□ -1.23
VARSP26640 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.37□□□□□ -1.23
VARSP26640 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.37□□□□□ -1.23
VARSP26640 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VARSP26640 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.37□□□□□ -1.23
VARSP26640 RPL10P16-201ENST00000325000 645 ntBASIC7.37□□□□□ -1.23
VARSP26640 AC067945.1-201ENST00000342609 618 ntBASIC7.37□□□□□ -1.23
VARSP26640 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARSP26640 Y_RNA.25-201ENST00000362528 102 ntBASIC7.37□□□□□ -1.23
VARSP26640 Y_RNA.193-201ENST00000363979 102 ntBASIC7.37□□□□□ -1.23
VARSP26640 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.37□□□□□ -1.23
VARSP26640 AL139327.1-201ENST00000382988 348 ntBASIC7.37□□□□□ -1.23
VARSP26640 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VARSP26640 RNU6-1148P-201ENST00000410992 104 ntBASIC7.37□□□□□ -1.23
VARSP26640 RNU4-61P-201ENST00000411243 107 ntBASIC7.37□□□□□ -1.23
VARSP26640 NPM1P40-201ENST00000412758 733 ntBASIC7.37□□□□□ -1.23
VARSP26640 AC004986.1-201ENST00000414855 607 ntBASIC7.37□□□□□ -1.23
VARSP26640 MTATP6P18-201ENST00000417994 673 ntBASIC7.37□□□□□ -1.23
VARSP26640 BOLA3P4-201ENST00000418151 400 ntBASIC7.37□□□□□ -1.23
VARSP26640 RBM6-203ENST00000421682 684 ntTSL 2 BASIC7.37□□□□□ -1.23
VARSP26640 NIPA2P1-201ENST00000426223 976 ntBASIC7.37□□□□□ -1.23
VARSP26640 SNRPEP4-201ENST00000435815 279 ntBASIC7.37□□□□□ -1.23
VARSP26640 AC093716.1-201ENST00000435923 377 ntBASIC7.37□□□□□ -1.23
VARSP26640 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC7.37□□□□□ -1.23
VARSP26640 PCBP2P1-201ENST00000437262 977 ntBASIC7.37□□□□□ -1.23
VARSP26640 LSM1P1-201ENST00000438629 273 ntBASIC7.37□□□□□ -1.23
VARSP26640 CECR9-201ENST00000453421 199 ntBASIC7.37□□□□□ -1.23
VARSP26640 CTSLP6-201ENST00000458273 1002 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms