Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RBPJP7-201ENST00000442803 1447 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 RBPJP5-201ENST00000449433 1447 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC024651.2-201ENST00000562480 2098 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 ZNF733P-202ENST00000444809 1573 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 OSBPL9P1-201ENST00000604744 1469 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC127070.3-201ENST00000503695 3263 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC000367.1-201ENST00000452711 1766 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 FUNDC2P3-201ENST00000334716 533 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 Y_RNA.11-201ENST00000362375 109 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 Y_RNA.408-201ENST00000383987 102 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 Y_RNA.465-201ENST00000384293 102 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 MIR548F1-201ENST00000408667 84 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 BX284632.2-201ENST00000421091 399 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 MTND1P2-201ENST00000430604 821 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 USP9YP35-201ENST00000435696 412 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AL512605.1-202ENST00000441919 381 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AP000281.1-201ENST00000444036 316 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AL359955.2-201ENST00000445380 353 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 SUMO2P2-201ENST00000456482 255 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 RANP2-201ENST00000456833 229 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 RPS27AP2-201ENST00000457576 465 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC098583.1-201ENST00000480875 255 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 HMGB1P36-201ENST00000487709 576 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC084024.2-201ENST00000503480 791 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC138866.2-201ENST00000508650 584 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 ATP5LP3-201ENST00000514223 304 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 OR4A43P-201ENST00000532938 908 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AL359704.2-201ENST00000604335 521 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC090186.1-201ENST00000605991 572 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AL445222.1-201ENST00000607259 628 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AC107075.1-201ENST00000613695 314 ntBASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CSB-PGBD3P0DP91 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC245100.2-201ENST00000454544 1679 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 WDR95P-201ENST00000425638 1542 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 MTND4P16-201ENST00000466108 1367 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC010624.4-201ENST00000597606 1351 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AC092111.1-201ENST00000618256 3358 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 AL117339.4-201ENST00000608335 7063 ntBASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
CSB-PGBD3P0DP91 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms