Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AL356317.1-201ENST00000396110 1436 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 ATP5HP3-201ENST00000396994 486 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 TRIM60P17-201ENST00000415181 719 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AF186996.5-201ENST00000418098 904 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 DPPA2P2-201ENST00000418220 897 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 OR2AH1P-201ENST00000425717 928 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AC000374.1-201ENST00000434698 1745 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 RAD1P2-201ENST00000446414 663 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 BTF3P6-201ENST00000448054 499 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 NDUFA5P8-201ENST00000449019 346 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 GYG1P1-201ENST00000460864 698 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AC090114.3-201ENST00000479267 829 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AC090686.1-201ENST00000481577 749 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 RN7SL244P-201ENST00000493405 297 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 SNRPCP2-201ENST00000504370 475 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AK4P6-201ENST00000505168 528 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 HMGB3P16-201ENST00000508037 287 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 COX6B1P5-201ENST00000509843 249 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 RNA5SP43-201ENST00000516559 110 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 BNIP3P1-201ENST00000547295 580 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 CYCSP40-201ENST00000575927 294 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 MIR3176-201ENST00000582210 90 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 TAS2R6P-201ENST00000605022 826 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AL592494.3-201ENST00000609485 464 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AL627230.1-201ENST00000613077 211 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AL049794.2-201ENST00000616301 365 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AL591926.8-201ENST00000616876 211 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 MIR6826-201ENST00000617808 98 ntBASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
IGHV3-43DP0DP04 AC020633.1-201ENST00000468439 2247 ntBASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 AL022393.1-201ENST00000625142 1677 ntBASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 PEX12P1-201ENST00000400284 1048 ntBASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 SNORA79B-201ENST00000410557 148 ntBASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 DDX39BP1-205ENST00000422507 192 ntBASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 Z85994.2-201ENST00000434327 452 ntBASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 OR7E125P-201ENST00000443450 846 ntBASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 AL137845.2-201ENST00000444292 988 ntBASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 RNU6-775P-201ENST00000459318 96 ntBASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 AC008953.1-201ENST00000497334 318 ntBASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 ATG10-AS1-201ENST00000504846 648 ntBASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 RNA5SP303-201ENST00000516192 130 ntBASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 RPL23AP53-201ENST00000521854 457 ntBASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.07□□□□□ -1.76
IGHV3-43DP0DP04 AC092490.3-201ENST00000545370 572 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms