Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC6P09630 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
HOXC6P09630 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC6P09630 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC6P09630 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC6P09630 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC6P09630 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HOXC6P09630 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC6P09630 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC6P09630 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC6P09630 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXC6P09630 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC6P09630 OR9G4-201ENST00000302957 984 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC6P09630 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC6P09630 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HOXC6P09630 RPS3AP23-201ENST00000401762 784 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC6P09630 AF186996.5-201ENST00000418098 904 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC6P09630 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.74□□□□□ -1.49
HOXC6P09630 AC009238.2-201ENST00000431026 355 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 MTND2P40-201ENST00000436718 841 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC6P09630 RN7SL443P-201ENST00000464331 290 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 AC015908.1-201ENST00000478739 476 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 AC093827.1-201ENST00000480094 861 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.74□□□□□ -1.49
HOXC6P09630 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.74□□□□□ -1.49
HOXC6P09630 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXC6P09630 HNRNPRP2-201ENST00000528421 743 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC6P09630 CR383656.14-201ENST00000551951 406 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 AC234775.3-201ENST00000564612 656 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 AC136624.4-201ENST00000573044 370 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 MIR4284-201ENST00000578924 81 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 RN7SL690P-201ENST00000582087 240 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC6P09630 MIR4760-201ENST00000585040 80 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 BNIP3P19-201ENST00000605397 577 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 AC017076.1-201ENST00000607613 578 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC6P09630 AC023510.2-201ENST00000622162 746 ntBASIC5.74□□□□□ -1.49
HOXC6P09630 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC6P09630 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
HOXC6P09630 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC6P09630 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HOXC6P09630 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC6P09630 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC6P09630 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC6P09630 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
HOXC6P09630 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC6P09630 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXC6P09630 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC6P09630 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXC6P09630 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC6P09630 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC6P09630 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC6P09630 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC6P09630 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXC6P09630 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC6P09630 RNA5SP191-201ENST00000362585 102 ntBASIC5.73□□□□□ -1.49
HOXC6P09630 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HOXC6P09630 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HOXC6P09630 AL355143.1-201ENST00000407101 841 ntBASIC5.73□□□□□ -1.49
HOXC6P09630 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC6P09630 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXC6P09630 AL354692.1-201ENST00000423044 315 ntBASIC5.73□□□□□ -1.49
HOXC6P09630 TRGV7-201ENST00000427089 353 ntBASIC5.73□□□□□ -1.49
HOXC6P09630 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC6P09630 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXC6P09630 TCEA1P1-201ENST00000449716 880 ntBASIC5.73□□□□□ -1.49
HOXC6P09630 GAPDHP14-201ENST00000450472 937 ntBASIC5.73□□□□□ -1.49
HOXC6P09630 PPP1R11P1-201ENST00000486095 376 ntBASIC5.73□□□□□ -1.49
HOXC6P09630 RN7SL814P-201ENST00000487715 300 ntBASIC5.73□□□□□ -1.49
HOXC6P09630 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXC6P09630 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXC6P09630 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXC6P09630 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXC6P09630 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
HOXC6P09630 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXC6P09630 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXC6P09630 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC6P09630 AL512310.9-201ENST00000553311 948 ntBASIC5.73□□□□□ -1.49
HOXC6P09630 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXC6P09630 AC009712.1-201ENST00000564938 316 ntBASIC5.73□□□□□ -1.49
HOXC6P09630 AC006249.1-201ENST00000621223 471 ntBASIC5.73□□□□□ -1.49
HOXC6P09630 AC091932.2-201ENST00000623014 291 ntBASIC5.73□□□□□ -1.49
HOXC6P09630 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXC6P09630 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.73□□□□□ -1.49
HOXC6P09630 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC6P09630 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXC6P09630 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXC6P09630 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXC6P09630 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXC6P09630 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC6P09630 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC6P09630 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC6P09630 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXC6P09630 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms