Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC234782.5-201ENST00000617723 324 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AL929601.4-201ENST00000613011 1341 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AL513548.1-201ENST00000562904 1724 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DPB1P04440 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HLA-DPB1P04440 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DPB1P04440 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
HLA-DPB1P04440 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.4□□□□□ -1.7
HLA-DPB1P04440 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DPB1P04440 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DPB1P04440 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DPB1P04440 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.4□□□□□ -1.7
HLA-DPB1P04440 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DPB1P04440 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DPB1P04440 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 RPL23P2-201ENST00000320371 421 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 RNU1-83P-201ENST00000363426 164 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 MIR323B-201ENST00000385269 82 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 NUDT19P3-201ENST00000404698 555 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 MIR1182-201ENST00000408363 97 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 CEACAMP8-201ENST00000413902 580 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 AC009237.10-201ENST00000414112 510 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 OR13Z1P-201ENST00000416141 834 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 HMGB1P4-201ENST00000455362 567 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 RPL5P16-201ENST00000471467 790 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 RN7SL629P-201ENST00000489622 285 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 OR2A3P-201ENST00000493774 953 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 RN7SL558P-201ENST00000497468 299 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 AC021146.3-201ENST00000511911 260 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 AC023389.2-201ENST00000580031 955 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 AC095055.1-201ENST00000603472 1113 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 AC104687.2-201ENST00000604442 342 ntBASIC4.4□□□□□ -1.71
HLA-DPB1P04440 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DPB1P04440 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 SNORA17.1-201ENST00000362945 126 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 U3.35-201ENST00000408405 208 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 RGS17P1-201ENST00000423358 553 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 RPS29P9-201ENST00000440360 171 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 CNOT7P2-201ENST00000441051 832 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 RN7SL222P-201ENST00000476452 299 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 AC008953.1-201ENST00000497334 318 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 RNA5SP34-201ENST00000516887 130 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 GSTP1P1-201ENST00000548078 319 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 MTND2P17-201ENST00000550281 688 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 AC079075.1-201ENST00000559543 878 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 MIR4433B-201ENST00000581329 102 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 AP000894.4-201ENST00000610185 483 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 RPSAP73-201ENST00000614820 330 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 AC140113.4-201ENST00000622087 222 ntBASIC4.39□□□□□ -1.71
HLA-DPB1P04440 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DPB1P04440 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms