Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.21□□□□□ -1.74
CD74P04233 AL645937.3-201ENST00000453647 936 ntBASIC4.21□□□□□ -1.74
CD74P04233 RPS6P2-201ENST00000454208 705 ntBASIC4.21□□□□□ -1.74
CD74P04233 HMGB1P4-201ENST00000455362 567 ntBASIC4.21□□□□□ -1.74
CD74P04233 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.21□□□□□ -1.74
CD74P04233 AC090142.2-201ENST00000483263 416 ntBASIC4.21□□□□□ -1.74
CD74P04233 RN7SL101P-201ENST00000496350 279 ntBASIC4.21□□□□□ -1.74
CD74P04233 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.21□□□□□ -1.74
CD74P04233 AC109481.1-201ENST00000509173 282 ntBASIC4.21□□□□□ -1.74
CD74P04233 AC106872.4-201ENST00000510050 523 ntBASIC4.21□□□□□ -1.74
CD74P04233 MTATP6P1-201ENST00000514057 681 ntBASIC4.21□□□□□ -1.74
CD74P04233 SNORD46.2-201ENST00000516021 102 ntBASIC4.21□□□□□ -1.74
CD74P04233 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.21□□□□□ -1.74
CD74P04233 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CD74P04233 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.21□□□□□ -1.74
CD74P04233 RPL21P7-201ENST00000557463 483 ntBASIC4.21□□□□□ -1.74
CD74P04233 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.21□□□□□ -1.74
CD74P04233 RPL10P14-201ENST00000565265 298 ntBASIC4.21□□□□□ -1.74
CD74P04233 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.21□□□□□ -1.74
CD74P04233 AC015720.2-201ENST00000567709 334 ntBASIC4.21□□□□□ -1.74
CD74P04233 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.21□□□□□ -1.74
CD74P04233 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.21□□□□□ -1.74
CD74P04233 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.21□□□□□ -1.74
CD74P04233 AC133552.5-201ENST00000604266 540 ntBASIC4.21□□□□□ -1.74
CD74P04233 AC127024.6-201ENST00000621598 424 ntBASIC4.21□□□□□ -1.74
CD74P04233 AC074101.1-201ENST00000637861 241 ntBASIC4.21□□□□□ -1.74
CD74P04233 SAMMSON-209ENST00000641222 1100 ntBASIC4.21□□□□□ -1.74
CD74P04233 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD74P04233 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.74
CD74P04233 AL450326.2-201ENST00000421913 1962 ntBASIC4.21□□□□□ -1.74
CD74P04233 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD74P04233 SMG1P6-201ENST00000532337 2930 ntBASIC4.21□□□□□ -1.74
CD74P04233 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD74P04233 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.21□□□□□ -1.74
CD74P04233 AC108751.5-201ENST00000492880 1336 ntBASIC4.21□□□□□ -1.74
CD74P04233 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.2□□□□□ -1.74
CD74P04233 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.2□□□□□ -1.74
CD74P04233 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.2□□□□□ -1.74
CD74P04233 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CD74P04233 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CD74P04233 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CD74P04233 SNORD96B-201ENST00000386148 79 ntBASIC4.2□□□□□ -1.74
CD74P04233 RNA5SP178-201ENST00000410380 128 ntBASIC4.2□□□□□ -1.74
CD74P04233 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.2□□□□□ -1.74
CD74P04233 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.2□□□□□ -1.74
CD74P04233 RPL7AP28-201ENST00000464513 571 ntBASIC4.2□□□□□ -1.74
CD74P04233 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.2□□□□□ -1.74
CD74P04233 RPL7P6-201ENST00000480903 738 ntBASIC4.2□□□□□ -1.74
CD74P04233 TRBV8-1-201ENST00000481590 279 ntBASIC4.2□□□□□ -1.74
CD74P04233 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.2□□□□□ -1.74
CD74P04233 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.2□□□□□ -1.74
CD74P04233 AC024940.3-201ENST00000538551 316 ntBASIC4.2□□□□□ -1.74
CD74P04233 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CD74P04233 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.2□□□□□ -1.74
CD74P04233 MTND2P17-201ENST00000550281 688 ntBASIC4.2□□□□□ -1.74
CD74P04233 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.2□□□□□ -1.74
CD74P04233 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.2□□□□□ -1.74
CD74P04233 AC079075.1-201ENST00000559543 878 ntBASIC4.2□□□□□ -1.74
CD74P04233 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.2□□□□□ -1.74
CD74P04233 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.2□□□□□ -1.74
CD74P04233 AC087783.2-201ENST00000605070 562 ntBASIC4.2□□□□□ -1.74
CD74P04233 AC067838.1-201ENST00000606064 577 ntBASIC4.2□□□□□ -1.74
CD74P04233 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.2□□□□□ -1.74
CD74P04233 MIR6729-201ENST00000618194 65 ntBASIC4.2□□□□□ -1.74
CD74P04233 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.2□□□□□ -1.74
CD74P04233 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.2□□□□□ -1.74
CD74P04233 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.2□□□□□ -1.74
CD74P04233 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CD74P04233 LINC01109-201ENST00000603837 3081 ntBASIC4.2□□□□□ -1.74
CD74P04233 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CD74P04233 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.19□□□□□ -1.74
CD74P04233 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD74P04233 SCN1A-220ENST00000641603 12506 ntBASIC4.19□□□□□ -1.74
CD74P04233 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CD74P04233 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.19□□□□□ -1.74
CD74P04233 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.19□□□□□ -1.74
CD74P04233 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD74P04233 HSPA8P17-201ENST00000427029 1382 ntBASIC4.19□□□□□ -1.74
CD74P04233 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD74P04233 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD74P04233 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD74P04233 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD74P04233 RNU6-178P-201ENST00000384631 104 ntBASIC4.19□□□□□ -1.74
CD74P04233 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CD74P04233 ATP5HP3-201ENST00000396994 486 ntBASIC4.19□□□□□ -1.74
CD74P04233 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.19□□□□□ -1.74
CD74P04233 SNORA77-201ENST00000408716 125 ntBASIC4.19□□□□□ -1.74
CD74P04233 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.19□□□□□ -1.74
CD74P04233 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.19□□□□□ -1.74
CD74P04233 AC098592.2-201ENST00000413158 265 ntBASIC4.19□□□□□ -1.74
CD74P04233 EEF1B2P8-201ENST00000414101 671 ntBASIC4.19□□□□□ -1.74
CD74P04233 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.19□□□□□ -1.74
CD74P04233 AL590609.2-201ENST00000421430 368 ntBASIC4.19□□□□□ -1.74
CD74P04233 TNPO1P1-201ENST00000423641 1138 ntBASIC4.19□□□□□ -1.74
CD74P04233 CHEK2P5-201ENST00000423877 246 ntBASIC4.19□□□□□ -1.74
CD74P04233 AC244033.1-201ENST00000426826 870 ntBASIC4.19□□□□□ -1.74
CD74P04233 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.19□□□□□ -1.74
CD74P04233 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.19□□□□□ -1.74
CD74P04233 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.19□□□□□ -1.74
CD74P04233 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms