Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.2□□□□□ -1.58
APOEP02649 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.2□□□□□ -1.58
APOEP02649 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.2□□□□□ -1.58
APOEP02649 TMX2P1-201ENST00000436507 708 ntBASIC5.2□□□□□ -1.58
APOEP02649 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.2□□□□□ -1.58
APOEP02649 MRPL35P2-201ENST00000448009 511 ntBASIC5.2□□□□□ -1.58
APOEP02649 TRY2P-201ENST00000448860 689 ntBASIC5.2□□□□□ -1.58
APOEP02649 AC002553.2-201ENST00000453217 340 ntBASIC5.2□□□□□ -1.58
APOEP02649 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.2□□□□□ -1.58
APOEP02649 NDUFB5P1-201ENST00000508134 564 ntBASIC5.2□□□□□ -1.58
APOEP02649 AC012339.2-201ENST00000523996 453 ntBASIC5.2□□□□□ -1.58
APOEP02649 AC011487.3-201ENST00000593607 453 ntBASIC5.2□□□□□ -1.58
APOEP02649 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.2□□□□□ -1.58
APOEP02649 AC005377.1-201ENST00000605126 456 ntBASIC5.2□□□□□ -1.58
APOEP02649 AL356752.1-201ENST00000615844 593 ntBASIC5.2□□□□□ -1.58
APOEP02649 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.2□□□□□ -1.58
APOEP02649 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
APOEP02649 STX3-208ENST00000641815 3236 ntBASIC5.2□□□□□ -1.58
APOEP02649 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
APOEP02649 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
APOEP02649 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.2□□□□□ -1.58
APOEP02649 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOEP02649 INTS6P1-201ENST00000504674 2530 ntBASIC5.2□□□□□ -1.58
APOEP02649 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOEP02649 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.19□□□□□ -1.58
APOEP02649 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
APOEP02649 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.19□□□□□ -1.58
APOEP02649 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
APOEP02649 MAPK10-263ENST00000641052 4307 ntBASIC5.19□□□□□ -1.58
APOEP02649 RNA5SP123-201ENST00000363244 119 ntBASIC5.19□□□□□ -1.58
APOEP02649 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
APOEP02649 ATP5HP3-201ENST00000396994 486 ntBASIC5.19□□□□□ -1.58
APOEP02649 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.19□□□□□ -1.58
APOEP02649 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.19□□□□□ -1.58
APOEP02649 RPS27P18-201ENST00000431701 247 ntBASIC5.19□□□□□ -1.58
APOEP02649 VN1R54P-201ENST00000435210 1049 ntBASIC5.19□□□□□ -1.58
APOEP02649 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.19□□□□□ -1.58
APOEP02649 RPL12P3-201ENST00000440080 396 ntBASIC5.19□□□□□ -1.58
APOEP02649 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.19□□□□□ -1.58
APOEP02649 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.19□□□□□ -1.58
APOEP02649 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.19□□□□□ -1.58
APOEP02649 BTF3P6-201ENST00000448054 499 ntBASIC5.19□□□□□ -1.58
APOEP02649 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.19□□□□□ -1.58
APOEP02649 RN7SL826P-201ENST00000479724 288 ntBASIC5.19□□□□□ -1.58
APOEP02649 AC008410.1-201ENST00000483777 339 ntBASIC5.19□□□□□ -1.58
APOEP02649 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
APOEP02649 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.19□□□□□ -1.58
APOEP02649 NDUFA5P12-201ENST00000503796 343 ntBASIC5.19□□□□□ -1.58
APOEP02649 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.19□□□□□ -1.58
APOEP02649 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
APOEP02649 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.19□□□□□ -1.58
APOEP02649 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.19□□□□□ -1.58
APOEP02649 EDDM3DP-201ENST00000554692 434 ntBASIC5.19□□□□□ -1.58
APOEP02649 TVP23CP2-201ENST00000571473 623 ntBASIC5.19□□□□□ -1.58
APOEP02649 AC019206.1-201ENST00000621938 425 ntBASIC5.19□□□□□ -1.58
APOEP02649 AC112694.2-201ENST00000623697 768 ntBASIC5.19□□□□□ -1.58
APOEP02649 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.19□□□□□ -1.58
APOEP02649 AC000374.1-201ENST00000434698 1745 ntBASIC5.19□□□□□ -1.58
APOEP02649 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
APOEP02649 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
APOEP02649 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
APOEP02649 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
APOEP02649 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
APOEP02649 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
APOEP02649 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
APOEP02649 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.19□□□□□ -1.58
APOEP02649 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.19□□□□□ -1.58
APOEP02649 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.19□□□□□ -1.58
APOEP02649 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
APOEP02649 AL672167.1-204ENST00000641875 3017 ntBASIC5.18□□□□□ -1.58
APOEP02649 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
APOEP02649 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.18□□□□□ -1.58
APOEP02649 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
APOEP02649 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.18□□□□□ -1.58
APOEP02649 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
APOEP02649 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
APOEP02649 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.18□□□□□ -1.58
APOEP02649 ECM1P2-201ENST00000503354 1577 ntBASIC5.18□□□□□ -1.58
APOEP02649 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
APOEP02649 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
APOEP02649 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
APOEP02649 RN7SKP95-201ENST00000362860 303 ntBASIC5.18□□□□□ -1.58
APOEP02649 SNORA58B-201ENST00000364259 136 ntBASIC5.18□□□□□ -1.58
APOEP02649 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
APOEP02649 AC233289.1-201ENST00000403700 508 ntBASIC5.18□□□□□ -1.58
APOEP02649 RN7SKP125-201ENST00000410481 302 ntBASIC5.18□□□□□ -1.58
APOEP02649 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.18□□□□□ -1.58
APOEP02649 CHEK2P3-201ENST00000416118 248 ntBASIC5.18□□□□□ -1.58
APOEP02649 AF186996.5-201ENST00000418098 904 ntBASIC5.18□□□□□ -1.58
APOEP02649 OR5M12P-201ENST00000423388 929 ntBASIC5.18□□□□□ -1.58
APOEP02649 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.18□□□□□ -1.58
APOEP02649 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.18□□□□□ -1.58
APOEP02649 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.18□□□□□ -1.58
APOEP02649 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.18□□□□□ -1.58
APOEP02649 SUMO2P1-206ENST00000445436 284 ntBASIC5.18□□□□□ -1.58
APOEP02649 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
APOEP02649 RPL7P61-201ENST00000451721 751 ntBASIC5.18□□□□□ -1.58
APOEP02649 AL645937.3-201ENST00000453647 936 ntBASIC5.18□□□□□ -1.58
APOEP02649 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.18□□□□□ -1.58
APOEP02649 HMGB1P4-201ENST00000455362 567 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms