Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SPTA1P02549 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SPTA1P02549 SMG1P7-201ENST00000565246 2704 ntBASIC4.52□□□□□ -1.69
SPTA1P02549 TMA16P2-201ENST00000413187 601 ntBASIC4.52□□□□□ -1.69
SPTA1P02549 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.52□□□□□ -1.69
SPTA1P02549 AL354766.1-201ENST00000423396 542 ntBASIC4.52□□□□□ -1.69
SPTA1P02549 FABP5P2-201ENST00000439042 408 ntBASIC4.52□□□□□ -1.69
SPTA1P02549 REG1CP-206ENST00000447469 496 ntBASIC4.52□□□□□ -1.69
SPTA1P02549 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.52□□□□□ -1.69
SPTA1P02549 RNA5SP392-201ENST00000516905 112 ntBASIC4.52□□□□□ -1.69
SPTA1P02549 AF131215.7-201ENST00000602443 707 ntBASIC4.52□□□□□ -1.69
SPTA1P02549 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.52□□□□□ -1.69
SPTA1P02549 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.52□□□□□ -1.69
SPTA1P02549 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SPTA1P02549 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SPTA1P02549 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SPTA1P02549 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.51□□□□□ -1.69
SPTA1P02549 CAST-222ENST00000508579 1758 ntTSL 2 BASIC4.51□□□□□ -1.69
SPTA1P02549 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.51□□□□□ -1.69
SPTA1P02549 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC4.51□□□□□ -1.69
SPTA1P02549 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC4.51□□□□□ -1.69
SPTA1P02549 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SPTA1P02549 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.51□□□□□ -1.69
SPTA1P02549 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 OR8V1P-201ENST00000395193 873 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 CYCSP19-201ENST00000411715 316 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 AL353626.3-201ENST00000413399 657 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.51□□□□□ -1.69
SPTA1P02549 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.51□□□□□ -1.69
SPTA1P02549 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 AC010326.1-201ENST00000462726 602 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 AC011276.1-201ENST00000469688 323 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 RN7SL814P-201ENST00000487715 300 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 AC104971.1-201ENST00000495117 578 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 OR4A43P-201ENST00000532938 908 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 AC068831.4-201ENST00000556118 109 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.51□□□□□ -1.69
SPTA1P02549 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.51□□□□□ -1.69
SPTA1P02549 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.51□□□□□ -1.69
SPTA1P02549 AC002044.3-201ENST00000623314 541 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SPTA1P02549 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC4.51□□□□□ -1.69
SPTA1P02549 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.51□□□□□ -1.69
SPTA1P02549 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.51□□□□□ -1.69
SPTA1P02549 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SPTA1P02549 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
SPTA1P02549 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 SNORA77-201ENST00000408716 125 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.51□□□□□ -1.69
SPTA1P02549 LINC02210-201ENST00000444561 288 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 PHBP16-201ENST00000446318 950 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.51□□□□□ -1.69
SPTA1P02549 CYCSP34-201ENST00000458172 304 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 NIFKP7-201ENST00000503365 834 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.51□□□□□ -1.69
SPTA1P02549 AC007016.1-201ENST00000512110 244 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 SNORA74D-201ENST00000516404 141 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 MTCO1P49-201ENST00000523429 802 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.51□□□□□ -1.69
SPTA1P02549 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.51□□□□□ -1.69
SPTA1P02549 AC005191.1-201ENST00000603950 358 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 AC069200.1-201ENST00000609511 323 ntBASIC4.51□□□□□ -1.69
SPTA1P02549 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.51□□□□□ -1.69
SPTA1P02549 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SPTA1P02549 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.5□□□□□ -1.69
SPTA1P02549 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
SPTA1P02549 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC4.5□□□□□ -1.69
SPTA1P02549 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SPTA1P02549 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SPTA1P02549 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.5□□□□□ -1.69
SPTA1P02549 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SPTA1P02549 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SPTA1P02549 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SPTA1P02549 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.5□□□□□ -1.69
SPTA1P02549 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
SPTA1P02549 SNORA73.1-201ENST00000363107 205 ntBASIC4.5□□□□□ -1.69
SPTA1P02549 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.5□□□□□ -1.69
SPTA1P02549 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.5□□□□□ -1.69
SPTA1P02549 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.5□□□□□ -1.69
SPTA1P02549 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.5□□□□□ -1.69
SPTA1P02549 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.5□□□□□ -1.69
SPTA1P02549 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.5□□□□□ -1.69
SPTA1P02549 MIR6853-201ENST00000619642 74 ntBASIC4.5□□□□□ -1.69
SPTA1P02549 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
SPTA1P02549 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.5□□□□□ -1.69
SPTA1P02549 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC4.5□□□□□ -1.69
SPTA1P02549 ECM1P2-201ENST00000503354 1577 ntBASIC4.5□□□□□ -1.69
SPTA1P02549 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms