Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COL4A1P02462 OR6C69P-201ENST00000394268 893 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 OR1F12-201ENST00000402365 945 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.69□□□□□ -1.5
COL4A1P02462 CKS1BP6-201ENST00000424932 240 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 OR4C10P-201ENST00000434991 931 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.69□□□□□ -1.5
COL4A1P02462 AC093840.1-201ENST00000511599 336 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.69□□□□□ -1.5
COL4A1P02462 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.69□□□□□ -1.5
COL4A1P02462 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.69□□□□□ -1.5
COL4A1P02462 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.69□□□□□ -1.5
COL4A1P02462 AC090948.1-201ENST00000607464 549 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 OR7A19P-201ENST00000608051 733 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 MIR6716-201ENST00000613413 80 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 MIR6891-201ENST00000618788 93 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 FRG1EP-201ENST00000634469 770 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A1P02462 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A1P02462 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A1P02462 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A1P02462 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL4A1P02462 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A1P02462 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
COL4A1P02462 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A1P02462 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A1P02462 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A1P02462 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A1P02462 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A1P02462 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A1P02462 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.68□□□□□ -1.5
COL4A1P02462 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.68□□□□□ -1.5
COL4A1P02462 AC092162.1-201ENST00000432828 434 ntBASIC5.68□□□□□ -1.5
COL4A1P02462 AC093824.1-201ENST00000508796 343 ntBASIC5.68□□□□□ -1.5
COL4A1P02462 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A1P02462 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.68□□□□□ -1.5
COL4A1P02462 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.68□□□□□ -1.5
COL4A1P02462 PRELID3BP3-201ENST00000584963 545 ntBASIC5.68□□□□□ -1.5
COL4A1P02462 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A1P02462 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.68□□□□□ -1.5
COL4A1P02462 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A1P02462 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
COL4A1P02462 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.67□□□□□ -1.5
COL4A1P02462 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A1P02462 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A1P02462 SNORA71.2-201ENST00000364941 134 ntBASIC5.67□□□□□ -1.5
COL4A1P02462 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
COL4A1P02462 AL356387.2-201ENST00000422272 243 ntBASIC5.67□□□□□ -1.5
COL4A1P02462 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.67□□□□□ -1.5
COL4A1P02462 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.67□□□□□ -1.5
COL4A1P02462 CYCSP34-201ENST00000458172 304 ntBASIC5.67□□□□□ -1.5
COL4A1P02462 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A1P02462 AC084824.1-201ENST00000550917 1005 ntBASIC5.67□□□□□ -1.5
COL4A1P02462 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.67□□□□□ -1.5
COL4A1P02462 AP001160.4-201ENST00000596971 382 ntBASIC5.67□□□□□ -1.5
COL4A1P02462 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.67□□□□□ -1.5
COL4A1P02462 AL591034.3-201ENST00000605511 685 ntBASIC5.67□□□□□ -1.5
COL4A1P02462 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A1P02462 AC015804.1-201ENST00000622935 435 ntBASIC5.67□□□□□ -1.5
COL4A1P02462 AP003497.2-201ENST00000624220 967 ntBASIC5.67□□□□□ -1.5
COL4A1P02462 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A1P02462 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.67□□□□□ -1.5
COL4A1P02462 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A1P02462 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A1P02462 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.67□□□□□ -1.5
COL4A1P02462 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A1P02462 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
COL4A1P02462 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A1P02462 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL4A1P02462 OR4K17-201ENST00000315543 1032 ntBASIC5.66□□□□□ -1.5
COL4A1P02462 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.66□□□□□ -1.5
COL4A1P02462 AC023424.1-201ENST00000496058 459 ntBASIC5.66□□□□□ -1.5
COL4A1P02462 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
COL4A1P02462 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.66□□□□□ -1.5
COL4A1P02462 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.66□□□□□ -1.5
COL4A1P02462 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A1P02462 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.66□□□□□ -1.5
COL4A1P02462 AC239868.2-201ENST00000564237 4527 ntBASIC5.66□□□□□ -1.5
COL4A1P02462 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A1P02462 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A1P02462 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.66□□□□□ -1.5
COL4A1P02462 AC090017.1-201ENST00000548612 1779 ntBASIC5.66□□□□□ -1.5
COL4A1P02462 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A1P02462 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A1P02462 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A1P02462 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A1P02462 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.66□□□□□ -1.5
COL4A1P02462 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
COL4A1P02462 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A1P02462 AC013429.2-201ENST00000418798 781 ntBASIC5.66□□□□□ -1.5
COL4A1P02462 KCTD10P1-201ENST00000434203 625 ntBASIC5.66□□□□□ -1.5
COL4A1P02462 AC093166.2-201ENST00000455969 1017 ntBASIC5.66□□□□□ -1.5
COL4A1P02462 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.66□□□□□ -1.5
COL4A1P02462 MRPL49P2-201ENST00000521066 465 ntBASIC5.66□□□□□ -1.5
COL4A1P02462 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.66□□□□□ -1.5
COL4A1P02462 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC5.66□□□□□ -1.5
COL4A1P02462 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL4A1P02462 AL445567.2-201ENST00000618935 498 ntBASIC5.66□□□□□ -1.5
COL4A1P02462 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.66□□□□□ -1.5
COL4A1P02462 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms