Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFP01375 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.76□□□□□ -1.65
TNFP01375 OR5AN2P-201ENST00000534535 896 ntBASIC4.76□□□□□ -1.65
TNFP01375 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.76□□□□□ -1.65
TNFP01375 AL049839.1-201ENST00000556151 657 ntBASIC4.76□□□□□ -1.65
TNFP01375 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.76□□□□□ -1.65
TNFP01375 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.76□□□□□ -1.65
TNFP01375 OOSP1P2-201ENST00000579644 351 ntBASIC4.76□□□□□ -1.65
TNFP01375 AC234771.5-201ENST00000600161 514 ntBASIC4.76□□□□□ -1.65
TNFP01375 AC098935.2-201ENST00000604222 466 ntBASIC4.76□□□□□ -1.65
TNFP01375 AL121932.1-201ENST00000605542 214 ntBASIC4.76□□□□□ -1.65
TNFP01375 AL022394.1-201ENST00000606979 292 ntBASIC4.76□□□□□ -1.65
TNFP01375 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TNFP01375 AC068446.1-201ENST00000556425 1549 ntBASIC4.76□□□□□ -1.65
TNFP01375 SMG1P4-204ENST00000523028 4131 ntBASIC4.76□□□□□ -1.65
TNFP01375 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TNFP01375 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TNFP01375 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFP01375 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFP01375 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFP01375 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFP01375 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.75□□□□□ -1.65
TNFP01375 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFP01375 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
TNFP01375 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.75□□□□□ -1.65
TNFP01375 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
TNFP01375 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TNFP01375 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFP01375 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TNFP01375 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFP01375 AL807761.1-201ENST00000417622 171 ntBASIC4.75□□□□□ -1.65
TNFP01375 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.75□□□□□ -1.65
TNFP01375 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.75□□□□□ -1.65
TNFP01375 AC016831.4-201ENST00000438302 307 ntBASIC4.75□□□□□ -1.65
TNFP01375 RPL7AP61-201ENST00000443410 636 ntBASIC4.75□□□□□ -1.65
TNFP01375 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.75□□□□□ -1.65
TNFP01375 RN7SL517P-201ENST00000462240 305 ntBASIC4.75□□□□□ -1.65
TNFP01375 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.75□□□□□ -1.65
TNFP01375 AC104971.1-201ENST00000495117 578 ntBASIC4.75□□□□□ -1.65
TNFP01375 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.75□□□□□ -1.65
TNFP01375 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.75□□□□□ -1.65
TNFP01375 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.75□□□□□ -1.65
TNFP01375 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.75□□□□□ -1.65
TNFP01375 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.75□□□□□ -1.65
TNFP01375 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.75□□□□□ -1.65
TNFP01375 AL022401.1-201ENST00000619498 108 ntBASIC4.75□□□□□ -1.65
TNFP01375 AC241377.1-201ENST00000619797 406 ntBASIC4.75□□□□□ -1.65
TNFP01375 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.75□□□□□ -1.65
TNFP01375 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.75□□□□□ -1.65
TNFP01375 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.75□□□□□ -1.65
TNFP01375 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.75□□□□□ -1.65
TNFP01375 AC104623.2-202ENST00000623477 4002 ntBASIC4.75□□□□□ -1.65
TNFP01375 OR9K1P-202ENST00000641111 3217 ntBASIC4.75□□□□□ -1.65
TNFP01375 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TNFP01375 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.75□□□□□ -1.65
TNFP01375 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TNFP01375 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TNFP01375 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.75□□□□□ -1.65
TNFP01375 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TNFP01375 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFP01375 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNFP01375 AC011447.7-201ENST00000624228 1590 ntBASIC4.74□□□□□ -1.65
TNFP01375 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFP01375 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFP01375 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFP01375 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
TNFP01375 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNFP01375 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFP01375 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNFP01375 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TNFP01375 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNFP01375 SNORA5.1-201ENST00000384275 131 ntBASIC4.74□□□□□ -1.65
TNFP01375 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFP01375 RSU1P3-201ENST00000412878 835 ntBASIC4.74□□□□□ -1.65
TNFP01375 FAR2P2-201ENST00000413041 594 ntBASIC4.74□□□□□ -1.65
TNFP01375 FAR2P4-202ENST00000425399 584 ntBASIC4.74□□□□□ -1.65
TNFP01375 AL359265.2-201ENST00000434367 631 ntBASIC4.74□□□□□ -1.65
TNFP01375 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFP01375 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TNFP01375 MRPL35P2-201ENST00000448009 511 ntBASIC4.74□□□□□ -1.65
TNFP01375 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.74□□□□□ -1.65
TNFP01375 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFP01375 MYL12BP2-201ENST00000503948 512 ntBASIC4.74□□□□□ -1.65
TNFP01375 AC073358.1-201ENST00000505671 684 ntBASIC4.74□□□□□ -1.65
TNFP01375 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFP01375 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFP01375 RNU1-6P-201ENST00000516290 144 ntBASIC4.74□□□□□ -1.65
TNFP01375 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFP01375 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.74□□□□□ -1.65
TNFP01375 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.74□□□□□ -1.65
TNFP01375 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFP01375 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFP01375 AC040958.1-201ENST00000561102 201 ntBASIC4.74□□□□□ -1.65
TNFP01375 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.74□□□□□ -1.65
TNFP01375 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFP01375 OR7A8P-201ENST00000595427 913 ntBASIC4.74□□□□□ -1.65
TNFP01375 MIR6798-201ENST00000612887 67 ntBASIC4.74□□□□□ -1.65
TNFP01375 AP000346.3-201ENST00000622821 210 ntBASIC4.74□□□□□ -1.65
TNFP01375 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFP01375 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms