Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN9O95484 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CLDN9O95484 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN9O95484 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLDN9O95484 AC002524.1-201ENST00000411687 547 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 AP000534.2-201ENST00000412729 568 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN9O95484 AL355433.1-201ENST00000422804 300 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 SETP10-201ENST00000424368 814 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN9O95484 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN9O95484 RN7SL517P-201ENST00000462240 305 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 RN7SL515P-201ENST00000463999 297 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 COPS8P2-201ENST00000473228 627 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN9O95484 AC079841.1-201ENST00000481228 950 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 OR11I1P-201ENST00000486033 954 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 HMGN2P25-201ENST00000486956 268 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 RN7SL30P-201ENST00000488416 306 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN9O95484 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN9O95484 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN9O95484 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN9O95484 OR7E128P-201ENST00000532736 1024 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 AC005868.1-201ENST00000536421 331 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN9O95484 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.81□□□□□ -1.64
CLDN9O95484 AL390334.1-201ENST00000556395 450 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 AC007225.2-201ENST00000562529 256 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN9O95484 MIR1269B-201ENST00000580405 75 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN9O95484 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.81□□□□□ -1.64
CLDN9O95484 AC011447.4-201ENST00000587562 111 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN9O95484 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN9O95484 AC104687.2-201ENST00000604442 342 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 AL049794.2-201ENST00000616301 365 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 AC074140.1-201ENST00000621617 208 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN9O95484 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
CLDN9O95484 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN9O95484 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN9O95484 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CLDN9O95484 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.81□□□□□ -1.64
CLDN9O95484 PABPC1P6-201ENST00000445594 1829 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN9O95484 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN9O95484 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN9O95484 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN9O95484 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN9O95484 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
CLDN9O95484 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN9O95484 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLDN9O95484 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN9O95484 SNURFL-201ENST00000309296 343 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 AL136116.2-201ENST00000404020 785 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 U3.36-201ENST00000408418 213 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN9O95484 OR2AH1P-201ENST00000425717 928 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN9O95484 HSPE1P16-201ENST00000426640 348 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN9O95484 AC092162.1-201ENST00000432828 434 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN9O95484 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CLDN9O95484 SUMO2P1-206ENST00000445436 284 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 NDUFA5P8-201ENST00000449019 346 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN9O95484 RPS4XP12-201ENST00000461747 709 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN9O95484 AC008953.1-201ENST00000497334 318 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN9O95484 COX6B1P5-201ENST00000509843 249 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN9O95484 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN9O95484 CCNHP1-201ENST00000513311 678 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 RNA5SP303-201ENST00000516192 130 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 OR8A2P-201ENST00000528631 952 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN9O95484 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN9O95484 AC090022.1-201ENST00000546569 311 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN9O95484 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN9O95484 AC016180.1-201ENST00000567945 403 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 MIR3176-201ENST00000582210 90 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN9O95484 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CLDN9O95484 AC008536.1-201ENST00000602872 669 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 AC087783.2-201ENST00000605070 562 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 MIR6719-201ENST00000622428 87 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 AC004808.2-201ENST00000627965 773 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CLDN9O95484 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.8□□□□□ -1.64
CLDN9O95484 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN9O95484 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN9O95484 AC107068.1-201ENST00000563286 4218 ntBASIC4.8□□□□□ -1.64
CLDN9O95484 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms