Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.89□□□□□ -1.63
ZIC3O60481 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.89□□□□□ -1.63
ZIC3O60481 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.89□□□□□ -1.63
ZIC3O60481 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
ZIC3O60481 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.89□□□□□ -1.63
ZIC3O60481 MIR1269B-201ENST00000580405 75 ntBASIC4.89□□□□□ -1.63
ZIC3O60481 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.89□□□□□ -1.63
ZIC3O60481 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.89□□□□□ -1.63
ZIC3O60481 CLIC4P2-201ENST00000601934 717 ntBASIC4.89□□□□□ -1.63
ZIC3O60481 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ZIC3O60481 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.89□□□□□ -1.63
ZIC3O60481 AL109659.3-201ENST00000624985 950 ntBASIC4.89□□□□□ -1.63
ZIC3O60481 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
ZIC3O60481 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
ZIC3O60481 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ZIC3O60481 AC235565.1-201ENST00000456962 1325 ntBASIC4.89□□□□□ -1.63
ZIC3O60481 AC007938.2-201ENST00000604666 2634 ntBASIC4.89□□□□□ -1.63
ZIC3O60481 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
ZIC3O60481 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.89□□□□□ -1.63
ZIC3O60481 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ZIC3O60481 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
ZIC3O60481 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZIC3O60481 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.88□□□□□ -1.63
ZIC3O60481 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ZIC3O60481 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ZIC3O60481 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZIC3O60481 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ZIC3O60481 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZIC3O60481 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.88□□□□□ -1.63
ZIC3O60481 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.88□□□□□ -1.63
ZIC3O60481 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.88□□□□□ -1.63
ZIC3O60481 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
ZIC3O60481 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZIC3O60481 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
ZIC3O60481 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZIC3O60481 DBIP1-201ENST00000401435 260 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.88□□□□□ -1.63
ZIC3O60481 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.88□□□□□ -1.63
ZIC3O60481 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.88□□□□□ -1.63
ZIC3O60481 SLC35E1P1-201ENST00000419313 864 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.88□□□□□ -1.63
ZIC3O60481 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.88□□□□□ -1.63
ZIC3O60481 HSPE1P16-201ENST00000426640 348 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.88□□□□□ -1.63
ZIC3O60481 GAPDHP25-201ENST00000447061 1001 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 AC098826.2-201ENST00000452011 651 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 HSPE1P22-201ENST00000456856 327 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 RPS20P4-201ENST00000461659 355 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 COPS8P2-201ENST00000473228 627 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.88□□□□□ -1.63
ZIC3O60481 RN7SL177P-201ENST00000476596 299 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 RPS21P4-201ENST00000487122 248 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 AC114322.1-201ENST00000506771 926 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 AC093815.1-201ENST00000508637 280 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.88□□□□□ -1.63
ZIC3O60481 SNORA19.3-201ENST00000516165 130 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.88□□□□□ -1.63
ZIC3O60481 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.88□□□□□ -1.63
ZIC3O60481 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.88□□□□□ -1.63
ZIC3O60481 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ZIC3O60481 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.88□□□□□ -1.63
ZIC3O60481 AL049779.2-201ENST00000553847 315 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 AL049870.4-201ENST00000555741 486 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 AGGF1P5-201ENST00000567900 919 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 AC005341.1-201ENST00000571086 708 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.88□□□□□ -1.63
ZIC3O60481 MTCO2P2-201ENST00000591258 225 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 RPP40P2-201ENST00000603596 712 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 SUMO2P15-201ENST00000604285 278 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 LSM1P2-201ENST00000604911 322 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.88□□□□□ -1.63
ZIC3O60481 uc_338.7-201ENST00000621834 124 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.88□□□□□ -1.63
ZIC3O60481 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.88□□□□□ -1.63
ZIC3O60481 AC083865.1-201ENST00000636634 831 ntBASIC4.88□□□□□ -1.63
ZIC3O60481 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ZIC3O60481 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ZIC3O60481 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ZIC3O60481 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZIC3O60481 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZIC3O60481 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ZIC3O60481 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.88□□□□□ -1.63
ZIC3O60481 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
ZIC3O60481 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ZIC3O60481 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
ZIC3O60481 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ZIC3O60481 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ZIC3O60481 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ZIC3O60481 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.87□□□□□ -1.63
ZIC3O60481 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ZIC3O60481 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ZIC3O60481 RN7SKP186-201ENST00000365371 303 ntBASIC4.87□□□□□ -1.63
ZIC3O60481 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
ZIC3O60481 SNORD56.6-201ENST00000384569 71 ntBASIC4.87□□□□□ -1.63
ZIC3O60481 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ZIC3O60481 PPIAP9-201ENST00000403866 498 ntBASIC4.87□□□□□ -1.63
ZIC3O60481 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.87□□□□□ -1.63
ZIC3O60481 EIF4A1P1-201ENST00000420241 934 ntBASIC4.87□□□□□ -1.63
ZIC3O60481 AC023128.2-201ENST00000420880 1223 ntBASIC4.87□□□□□ -1.63
ZIC3O60481 AL355433.1-201ENST00000422804 300 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms