Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.58□□□□□ -1.52
PROM1O43490 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.58□□□□□ -1.52
PROM1O43490 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.58□□□□□ -1.52
PROM1O43490 AC006115.2-201ENST00000596823 202 ntBASIC5.58□□□□□ -1.52
PROM1O43490 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.58□□□□□ -1.52
PROM1O43490 AC007349.4-201ENST00000608114 532 ntBASIC5.58□□□□□ -1.52
PROM1O43490 MIR6793-201ENST00000612376 63 ntBASIC5.58□□□□□ -1.52
PROM1O43490 AL359513.1-201ENST00000614364 557 ntBASIC5.58□□□□□ -1.52
PROM1O43490 AC026585.1-201ENST00000619582 524 ntBASIC5.58□□□□□ -1.52
PROM1O43490 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.58□□□□□ -1.52
PROM1O43490 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.58□□□□□ -1.52
PROM1O43490 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
PROM1O43490 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PROM1O43490 AL121839.2-201ENST00000565058 6943 ntBASIC5.58□□□□□ -1.52
PROM1O43490 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PROM1O43490 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PROM1O43490 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
PROM1O43490 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PROM1O43490 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PROM1O43490 RARSP1-201ENST00000542842 1418 ntBASIC5.57□□□□□ -1.52
PROM1O43490 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PROM1O43490 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PROM1O43490 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PROM1O43490 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.57□□□□□ -1.52
PROM1O43490 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PROM1O43490 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PROM1O43490 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PROM1O43490 AL354890.1-201ENST00000413730 346 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.57□□□□□ -1.52
PROM1O43490 BTF3P9-201ENST00000418784 283 ntBASIC5.57□□□□□ -1.52
PROM1O43490 MFSD13B-201ENST00000420133 1290 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AC079355.1-201ENST00000421770 223 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AL513175.2-201ENST00000422071 443 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.57□□□□□ -1.52
PROM1O43490 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.57□□□□□ -1.52
PROM1O43490 AC073410.1-201ENST00000435125 589 ntBASIC5.57□□□□□ -1.52
PROM1O43490 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PROM1O43490 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.57□□□□□ -1.52
PROM1O43490 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.57□□□□□ -1.52
PROM1O43490 HSPE1P22-201ENST00000456856 327 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AC005410.1-202ENST00000460347 485 ntBASIC5.57□□□□□ -1.52
PROM1O43490 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.57□□□□□ -1.52
PROM1O43490 RN7SL177P-201ENST00000476596 299 ntBASIC5.57□□□□□ -1.52
PROM1O43490 RPS3AP22-201ENST00000488297 769 ntBASIC5.57□□□□□ -1.52
PROM1O43490 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PROM1O43490 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.57□□□□□ -1.52
PROM1O43490 AC006499.4-201ENST00000510947 694 ntBASIC5.57□□□□□ -1.52
PROM1O43490 SCARNA18.1-201ENST00000516330 83 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AC027308.1-201ENST00000517993 110 ntBASIC5.57□□□□□ -1.52
PROM1O43490 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.57□□□□□ -1.52
PROM1O43490 WBP1LP3-201ENST00000523033 208 ntBASIC5.57□□□□□ -1.52
PROM1O43490 OR4A2P-201ENST00000527276 913 ntBASIC5.57□□□□□ -1.52
PROM1O43490 NDUFS5P6-201ENST00000529136 295 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.57□□□□□ -1.52
PROM1O43490 AC023050.2-201ENST00000544968 387 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AC087897.1-201ENST00000550134 156 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AL049830.4-201ENST00000555149 351 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.57□□□□□ -1.52
PROM1O43490 AC109446.2-201ENST00000567872 497 ntBASIC5.57□□□□□ -1.52
PROM1O43490 GARSP1-201ENST00000570895 719 ntBASIC5.57□□□□□ -1.52
PROM1O43490 TXNP4-201ENST00000575018 310 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.57□□□□□ -1.52
PROM1O43490 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.57□□□□□ -1.52
PROM1O43490 MIR4776-2-201ENST00000580204 80 ntBASIC5.57□□□□□ -1.52
PROM1O43490 RN7SL622P-201ENST00000585292 275 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AC012254.4-201ENST00000588843 273 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.57□□□□□ -1.52
PROM1O43490 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.57□□□□□ -1.52
PROM1O43490 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PROM1O43490 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.57□□□□□ -1.52
PROM1O43490 SUMO2P14-201ENST00000604488 293 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AC100767.2-201ENST00000604840 693 ntBASIC5.57□□□□□ -1.52
PROM1O43490 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.57□□□□□ -1.52
PROM1O43490 MIR6768-201ENST00000610734 72 ntBASIC5.57□□□□□ -1.52
PROM1O43490 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.57□□□□□ -1.52
PROM1O43490 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.57□□□□□ -1.52
PROM1O43490 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PROM1O43490 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.57□□□□□ -1.52
PROM1O43490 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.57□□□□□ -1.52
PROM1O43490 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.57□□□□□ -1.52
PROM1O43490 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PROM1O43490 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PROM1O43490 AC139713.2-210ENST00000641741 992 ntBASIC5.57□□□□□ -1.52
PROM1O43490 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PROM1O43490 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PROM1O43490 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.57□□□□□ -1.52
PROM1O43490 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.57□□□□□ -1.52
PROM1O43490 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PROM1O43490 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PROM1O43490 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.57□□□□□ -1.52
PROM1O43490 TTC39DP-201ENST00000416781 1688 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms