Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 RN7SKP118-201ENST00000364331 330 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 SNORA62.2-201ENST00000364672 152 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 SNORA68-201ENST00000384437 133 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.81□□□□□ -1.16
HOXA2O43364 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC7.81□□□□□ -1.16
HOXA2O43364 RPL34P19-201ENST00000415903 342 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 ELOCP4-201ENST00000420090 333 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.81□□□□□ -1.16
HOXA2O43364 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.81□□□□□ -1.16
HOXA2O43364 GAPDHP19-201ENST00000431768 1005 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 AC009518.3-201ENST00000438972 253 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.81□□□□□ -1.16
HOXA2O43364 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 RPSAP7-201ENST00000456871 885 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC7.81□□□□□ -1.16
HOXA2O43364 RNU6-261P-201ENST00000459506 102 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.81□□□□□ -1.16
HOXA2O43364 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.81□□□□□ -1.16
HOXA2O43364 MRPL57P6-201ENST00000506570 309 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC7.81□□□□□ -1.16
HOXA2O43364 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.81□□□□□ -1.16
HOXA2O43364 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC7.81□□□□□ -1.16
HOXA2O43364 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC7.81□□□□□ -1.16
HOXA2O43364 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.81□□□□□ -1.16
HOXA2O43364 OR5M6P-201ENST00000530227 937 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 ELOCP31-201ENST00000540463 467 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.81□□□□□ -1.16
HOXA2O43364 AL135978.1-201ENST00000553618 1266 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.81□□□□□ -1.16
HOXA2O43364 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.81□□□□□ -1.16
HOXA2O43364 AC008638.3-201ENST00000603341 463 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 AC090525.3-201ENST00000605601 189 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 AC093913.1-201ENST00000614178 329 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 AC099654.6-201ENST00000636487 512 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.81□□□□□ -1.16
HOXA2O43364 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.81□□□□□ -1.16
HOXA2O43364 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.81□□□□□ -1.16
HOXA2O43364 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 AC006116.1-201ENST00000587908 2171 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.81□□□□□ -1.16
HOXA2O43364 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.81□□□□□ -1.16
HOXA2O43364 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.81□□□□□ -1.16
HOXA2O43364 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
HOXA2O43364 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.81□□□□□ -1.16
HOXA2O43364 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 AL359263.1-201ENST00000441188 2796 ntBASIC7.81□□□□□ -1.16
HOXA2O43364 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
HOXA2O43364 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXA2O43364 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HOXA2O43364 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HOXA2O43364 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
HOXA2O43364 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
HOXA2O43364 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
HOXA2O43364 LINC00622-201ENST00000562811 1570 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HOXA2O43364 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HOXA2O43364 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HOXA2O43364 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.8□□□□□ -1.16
HOXA2O43364 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HOXA2O43364 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HOXA2O43364 MIR99A-201ENST00000384906 81 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 FGFR1OP2P1-201ENST00000395943 500 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 RPL7P58-201ENST00000402913 758 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 AL136100.1-201ENST00000407696 330 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 RN7SKP148-201ENST00000410179 275 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 CBX1P3-201ENST00000413296 527 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.8□□□□□ -1.16
HOXA2O43364 AC009161.1-201ENST00000417306 376 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 MTATP6P18-201ENST00000417994 673 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 MTCO1P27-201ENST00000448269 226 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.8□□□□□ -1.16
HOXA2O43364 NDUFA5P7-201ENST00000452914 242 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 BTF3P5-201ENST00000457252 467 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HOXA2O43364 RN7SL790P-201ENST00000474043 298 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 AC117394.1-201ENST00000477323 567 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
HOXA2O43364 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.8□□□□□ -1.16
HOXA2O43364 NANOGNBP2-201ENST00000544753 553 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 AC008083.2-201ENST00000546707 476 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 AL109766.1-201ENST00000555080 552 ntBASIC7.8□□□□□ -1.16
HOXA2O43364 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.8□□□□□ -1.16
HOXA2O43364 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC7.8□□□□□ -1.16
HOXA2O43364 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HOXA2O43364 AL953862.2-201ENST00000603089 820 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms