Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC007275.1-201ENST00000621243 671 ntBASIC5.52□□□□□ -1.53
MSI1O43347 AC015722.2-201ENST00000622210 551 ntBASIC5.52□□□□□ -1.53
MSI1O43347 AC073342.3-201ENST00000624211 193 ntBASIC5.52□□□□□ -1.53
MSI1O43347 AC097520.1-201ENST00000624435 385 ntBASIC5.52□□□□□ -1.53
MSI1O43347 AP003400.3-201ENST00000624904 346 ntBASIC5.52□□□□□ -1.53
MSI1O43347 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
MSI1O43347 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.52□□□□□ -1.53
MSI1O43347 AC053481.2-202ENST00000582394 1500 ntBASIC5.52□□□□□ -1.53
MSI1O43347 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
MSI1O43347 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MSI1O43347 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
MSI1O43347 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MSI1O43347 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.51□□□□□ -1.53
MSI1O43347 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
MSI1O43347 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
MSI1O43347 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MSI1O43347 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MSI1O43347 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MSI1O43347 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.51□□□□□ -1.53
MSI1O43347 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.51□□□□□ -1.53
MSI1O43347 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
MSI1O43347 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MSI1O43347 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.51□□□□□ -1.53
MSI1O43347 RN7SKP273-201ENST00000411392 314 ntBASIC5.51□□□□□ -1.53
MSI1O43347 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.51□□□□□ -1.53
MSI1O43347 BMS1P13-201ENST00000417301 885 ntBASIC5.51□□□□□ -1.53
MSI1O43347 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.51□□□□□ -1.53
MSI1O43347 AC009784.1-201ENST00000426484 460 ntBASIC5.51□□□□□ -1.53
MSI1O43347 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.51□□□□□ -1.53
MSI1O43347 AC046176.1-201ENST00000435260 1170 ntBASIC5.51□□□□□ -1.53
MSI1O43347 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.51□□□□□ -1.53
MSI1O43347 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.51□□□□□ -1.53
MSI1O43347 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.51□□□□□ -1.53
MSI1O43347 OFD1P3Y-201ENST00000453312 783 ntBASIC5.51□□□□□ -1.53
MSI1O43347 RN7SL515P-201ENST00000463999 297 ntBASIC5.51□□□□□ -1.53
MSI1O43347 RN7SL197P-201ENST00000466981 299 ntBASIC5.51□□□□□ -1.53
MSI1O43347 RPS18P6-201ENST00000476880 458 ntBASIC5.51□□□□□ -1.53
MSI1O43347 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.51□□□□□ -1.53
MSI1O43347 AC138409.2-202ENST00000507274 458 ntBASIC5.51□□□□□ -1.53
MSI1O43347 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.51□□□□□ -1.53
MSI1O43347 RNU5A-7P-201ENST00000515979 116 ntBASIC5.51□□□□□ -1.53
MSI1O43347 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.51□□□□□ -1.53
MSI1O43347 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.51□□□□□ -1.53
MSI1O43347 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.51□□□□□ -1.53
MSI1O43347 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.51□□□□□ -1.53
MSI1O43347 AC006116.5-201ENST00000591936 559 ntBASIC5.51□□□□□ -1.53
MSI1O43347 AC005252.1-201ENST00000604518 1063 ntBASIC5.51□□□□□ -1.53
MSI1O43347 AP004372.1-201ENST00000604842 844 ntBASIC5.51□□□□□ -1.53
MSI1O43347 AC026741.1-201ENST00000605892 482 ntBASIC5.51□□□□□ -1.53
MSI1O43347 AC007786.3-201ENST00000615154 596 ntBASIC5.51□□□□□ -1.53
MSI1O43347 AP003476.1-201ENST00000623984 516 ntBASIC5.51□□□□□ -1.53
MSI1O43347 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.51□□□□□ -1.53
MSI1O43347 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MSI1O43347 AC093909.5-201ENST00000621839 1799 ntBASIC5.51□□□□□ -1.53
MSI1O43347 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.51□□□□□ -1.53
MSI1O43347 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MSI1O43347 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.51□□□□□ -1.53
MSI1O43347 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
MSI1O43347 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MSI1O43347 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
MSI1O43347 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
MSI1O43347 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MSI1O43347 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
MSI1O43347 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MSI1O43347 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MSI1O43347 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
MSI1O43347 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MSI1O43347 RPL23P2-201ENST00000320371 421 ntBASIC5.5□□□□□ -1.53
MSI1O43347 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MSI1O43347 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MSI1O43347 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
MSI1O43347 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MSI1O43347 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.5□□□□□ -1.53
MSI1O43347 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.5□□□□□ -1.53
MSI1O43347 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.5□□□□□ -1.53
MSI1O43347 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.5□□□□□ -1.53
MSI1O43347 AC093655.2-201ENST00000425735 631 ntBASIC5.5□□□□□ -1.53
MSI1O43347 AC013262.1-201ENST00000426710 252 ntBASIC5.5□□□□□ -1.53
MSI1O43347 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.5□□□□□ -1.53
MSI1O43347 AC114973.1-201ENST00000429057 632 ntBASIC5.5□□□□□ -1.53
MSI1O43347 MTATP6P17-201ENST00000431030 672 ntBASIC5.5□□□□□ -1.53
MSI1O43347 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.5□□□□□ -1.53
MSI1O43347 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MSI1O43347 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.5□□□□□ -1.53
MSI1O43347 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.5□□□□□ -1.53
MSI1O43347 EEF1B2P5-201ENST00000444820 548 ntBASIC5.5□□□□□ -1.53
MSI1O43347 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MSI1O43347 RPL23AP23-201ENST00000452590 471 ntBASIC5.5□□□□□ -1.53
MSI1O43347 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.5□□□□□ -1.53
MSI1O43347 AC004815.1-201ENST00000484185 331 ntBASIC5.5□□□□□ -1.53
MSI1O43347 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.5□□□□□ -1.53
MSI1O43347 AC008638.1-201ENST00000506035 866 ntBASIC5.5□□□□□ -1.53
MSI1O43347 SEPT10P1-201ENST00000517342 1162 ntBASIC5.5□□□□□ -1.53
MSI1O43347 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MSI1O43347 AC020937.1-201ENST00000519677 1013 ntBASIC5.5□□□□□ -1.53
MSI1O43347 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.5□□□□□ -1.53
MSI1O43347 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.5□□□□□ -1.53
MSI1O43347 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.5□□□□□ -1.53
MSI1O43347 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.5□□□□□ -1.53
MSI1O43347 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms