Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC28A1O00337 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC28A1O00337 AL512310.9-201ENST00000553311 948 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
SLC28A1O00337 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SLC28A1O00337 AC127381.1-201ENST00000555979 939 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 SETP1-201ENST00000556014 845 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 AC012414.2-201ENST00000559474 187 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC28A1O00337 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC28A1O00337 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC28A1O00337 AP005432.2-201ENST00000608162 586 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 AL359513.1-201ENST00000614364 557 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 AC015914.2-201ENST00000618167 288 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 MIR6861-201ENST00000618657 64 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC28A1O00337 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
SLC28A1O00337 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC28A1O00337 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC28A1O00337 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC28A1O00337 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SLC28A1O00337 AC235565.1-201ENST00000456962 1325 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC28A1O00337 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC28A1O00337 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC28A1O00337 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
SLC28A1O00337 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC28A1O00337 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC28A1O00337 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC28A1O00337 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC28A1O00337 AC132825.1-201ENST00000463573 2247 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC28A1O00337 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC28A1O00337 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SLC28A1O00337 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC28A1O00337 AC013442.1-201ENST00000397347 228 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 MIR1282-201ENST00000408865 101 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 BTF3P9-201ENST00000418784 283 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 AC002069.1-201ENST00000429649 1159 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 AC022022.1-201ENST00000430304 178 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC28A1O00337 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC28A1O00337 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC28A1O00337 SCAND3P1-201ENST00000439854 1060 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC28A1O00337 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC28A1O00337 OR52E7P-201ENST00000452394 933 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC28A1O00337 RPL5P13-201ENST00000462840 709 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 RN7SL184P-201ENST00000488308 297 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC28A1O00337 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC28A1O00337 HAUS1P1-201ENST00000505275 832 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 HMGB3P16-201ENST00000508037 287 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 MTATP6P1-201ENST00000514057 681 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC28A1O00337 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC28A1O00337 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.89□□□□□ -1.63
SLC28A1O00337 AC134349.2-201ENST00000535136 910 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 AC116553.2-201ENST00000564203 463 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 CD24P2-201ENST00000565486 219 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 MIR3614-201ENST00000581261 86 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC28A1O00337 MIMT1-201ENST00000597105 1050 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 AP004372.1-201ENST00000604842 844 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 AC034236.3-201ENST00000605999 461 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC28A1O00337 AC109309.2-201ENST00000612597 332 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 RPSAP73-201ENST00000614820 330 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC28A1O00337 AC090527.3-201ENST00000619041 548 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC28A1O00337 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC28A1O00337 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC28A1O00337 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC28A1O00337 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC28A1O00337 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC28A1O00337 TTC39DP-201ENST00000416781 1688 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 AC025574.1-201ENST00000554784 1653 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 HSPA8P17-201ENST00000427029 1382 ntBASIC4.89□□□□□ -1.63
SLC28A1O00337 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC28A1O00337 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC28A1O00337 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SLC28A1O00337 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC28A1O00337 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC28A1O00337 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SLC28A1O00337 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SLC28A1O00337 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC28A1O00337 OR5T3-201ENST00000303059 1023 ntBASIC4.88□□□□□ -1.63
SLC28A1O00337 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC28A1O00337 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC28A1O00337 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SLC28A1O00337 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms