Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UPK1AO00322 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.6□□□□□ -1.67
UPK1AO00322 NPM1P33-201ENST00000438918 872 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.6□□□□□ -1.67
UPK1AO00322 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.6□□□□□ -1.67
UPK1AO00322 AC004815.1-201ENST00000484185 331 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 RN7SL97P-201ENST00000486780 299 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 MRPS33P2-201ENST00000507850 322 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.6□□□□□ -1.67
UPK1AO00322 RNU6-1334P-201ENST00000516032 105 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 RN7SKP147-201ENST00000517154 244 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.6□□□□□ -1.67
UPK1AO00322 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UPK1AO00322 AC007066.2-202ENST00000566531 914 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.6□□□□□ -1.67
UPK1AO00322 AL356752.1-201ENST00000615844 593 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 OR8G7P-201ENST00000616658 848 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.6□□□□□ -1.67
UPK1AO00322 AC019206.1-201ENST00000621938 425 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.6□□□□□ -1.67
UPK1AO00322 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.6□□□□□ -1.67
UPK1AO00322 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
UPK1AO00322 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
UPK1AO00322 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
UPK1AO00322 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
UPK1AO00322 SAMMSON-213ENST00000641336 1521 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 UGT2B26P-201ENST00000508672 1613 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
UPK1AO00322 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
UPK1AO00322 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
UPK1AO00322 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
UPK1AO00322 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
UPK1AO00322 AC008079.2-201ENST00000623543 20396 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
UPK1AO00322 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
UPK1AO00322 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.59□□□□□ -1.67
UPK1AO00322 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
UPK1AO00322 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
UPK1AO00322 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
UPK1AO00322 RNU6-249P-201ENST00000363016 102 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
UPK1AO00322 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.59□□□□□ -1.67
UPK1AO00322 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
UPK1AO00322 AL021331.1-201ENST00000402817 582 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 AL357515.1-201ENST00000402967 542 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 RNU6-233P-201ENST00000410845 141 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.59□□□□□ -1.67
UPK1AO00322 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.59□□□□□ -1.67
UPK1AO00322 AC093162.1-201ENST00000419682 124 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 AC092162.1-201ENST00000432828 434 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
UPK1AO00322 HSPA8P18-201ENST00000439846 1928 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 AC092647.3-201ENST00000443044 633 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.59□□□□□ -1.67
UPK1AO00322 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
UPK1AO00322 CDY11P-201ENST00000447168 1651 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 AC000111.2-201ENST00000448200 210 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 AC073850.1-201ENST00000449243 255 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
UPK1AO00322 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
UPK1AO00322 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
UPK1AO00322 RPL37AP8-201ENST00000494116 276 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 AC021146.3-201ENST00000511911 260 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.59□□□□□ -1.67
UPK1AO00322 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.59□□□□□ -1.67
UPK1AO00322 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.59□□□□□ -1.67
UPK1AO00322 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.59□□□□□ -1.67
UPK1AO00322 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.59□□□□□ -1.67
UPK1AO00322 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
UPK1AO00322 AC010809.3-201ENST00000621310 641 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.59□□□□□ -1.67
UPK1AO00322 OR51C1P-202ENST00000641159 1444 ntBASIC4.59□□□□□ -1.67
UPK1AO00322 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
UPK1AO00322 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
UPK1AO00322 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
UPK1AO00322 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
UPK1AO00322 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1AO00322 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1AO00322 DDX18P4-201ENST00000511690 1966 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1AO00322 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
UPK1AO00322 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
UPK1AO00322 CASC19-281ENST00000642118 1554 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1AO00322 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.58□□□□□ -1.68
UPK1AO00322 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1AO00322 RARSP1-201ENST00000542842 1418 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1AO00322 AC109780.1-201ENST00000451768 1344 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
UPK1AO00322 RNA5SP305-201ENST00000362665 119 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 RNU4-4P-201ENST00000364588 130 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
UPK1AO00322 AL050305.1-201ENST00000399993 1230 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 RNU4-34P-201ENST00000410431 124 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1AO00322 TBCAP2-201ENST00000416175 326 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1AO00322 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms