Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNA5SP455-201ENST00000365190 119 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 U3.25-201ENST00000391209 220 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AL021331.1-201ENST00000402817 582 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 OR3A2-201ENST00000408891 1076 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 BMS1P13-201ENST00000417301 885 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 OR6C64P-201ENST00000419708 825 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AL121776.1-201ENST00000429337 372 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AL137845.2-201ENST00000444292 988 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AL163193.1-201ENST00000444895 788 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AL389915.2-201ENST00000454576 441 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 NPM1P29-201ENST00000483112 803 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 RN7SL591P-201ENST00000496150 292 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 OR11J2P-201ENST00000555298 907 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AC130352.1-201ENST00000602979 661 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AC010424.2-201ENST00000607594 443 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AC016252.1-201ENST00000609721 474 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AL139407.1-201ENST00000613826 1175 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AL356752.1-201ENST00000615844 593 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AL049767.1-202ENST00000637826 242 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 MAPK10-303ENST00000641324 3959 ntBASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 AC123912.3-201ENST00000600907 1367 ntBASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 SOCS5P3-201ENST00000425115 1576 ntBASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 RN7SKP229-201ENST00000410465 302 ntBASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 OR2AO1P-201ENST00000476497 403 ntBASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 DEFB109F-201ENST00000491870 277 ntBASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 SETP1-201ENST00000556014 845 ntBASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 AP000894.4-201ENST00000610185 483 ntBASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 AC027279.1-201ENST00000568885 4284 ntBASIC4.8□□□□□ -1.64
TRIM49D1C9J1S8 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 RNA5SP428-201ENST00000365129 132 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 MIR143-201ENST00000385300 106 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 Z68694.1-201ENST00000413929 841 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 NPM1P4-201ENST00000414095 812 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 RPL7P57-201ENST00000423238 740 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 RPS17P8-201ENST00000434525 335 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 FAR2P1-206ENST00000449736 709 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 RN7SL319P-201ENST00000480656 221 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms