Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 AC015802.2-201ENST00000589690 189 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 AC004232.3-201ENST00000622977 525 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 AP000770.2-201ENST00000623694 100 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.46□□□□□ -1.37
COL4A3BPQ9Y5P4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.46□□□□□ -1.37
COL4A3BPQ9Y5P4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.46□□□□□ -1.37
COL4A3BPQ9Y5P4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL4A3BPQ9Y5P4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.46□□□□□ -1.37
COL4A3BPQ9Y5P4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.46□□□□□ -1.37
COL4A3BPQ9Y5P4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 ZNF29P-201ENST00000225587 168 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC087752.1-201ENST00000391360 558 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AL512422.1-201ENST00000407033 553 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 BTF3P8-201ENST00000414577 526 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC093155.2-201ENST00000420734 937 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC127526.2-201ENST00000426436 775 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 CRIP1P1-201ENST00000427567 185 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 MTND2P5-201ENST00000432656 1006 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 RPS7P5-201ENST00000441482 581 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC064862.4-201ENST00000442180 334 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 DNAJC19P5-201ENST00000443295 316 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC005002.1-201ENST00000447458 540 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 MTND2P8-201ENST00000450555 1025 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 FRG2FP-204ENST00000453982 852 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 RPL23AP71-201ENST00000470966 469 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC091959.2-201ENST00000477363 321 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC091860.1-201ENST00000505723 432 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 COX6B1P6-201ENST00000522347 255 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC112191.2-201ENST00000522428 333 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 RBM22P1-201ENST00000578589 1214 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AP001542.2-201ENST00000593141 364 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC019072.1-201ENST00000604535 1551 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC009237.12-201ENST00000604755 742 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AC093388.1-201ENST00000609166 430 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AL352984.2-201ENST00000611153 546 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AL121890.2-201ENST00000617644 465 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 MIR6729-201ENST00000618194 65 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 AL078595.3-201ENST00000623815 1166 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 CDRT1-208ENST00000630868 794 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 MIR4302-201ENST00000638058 60 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 MIR193BHG-214ENST00000641765 509 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 SAMMSON-210ENST00000641260 1308 ntBASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL4A3BPQ9Y5P4 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AP004607.3-201ENST00000530354 3915 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 RNU6-224P-201ENST00000384055 107 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 OR2W4P-201ENST00000406496 926 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 RN7SKP206-201ENST00000410823 293 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AL449283.1-202ENST00000418249 604 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 CHEK2P5-201ENST00000423877 246 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 SUMO2P3-201ENST00000438311 288 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AC092013.1-201ENST00000438795 332 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AC099063.2-201ENST00000446360 662 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 BX248409.1-201ENST00000455497 255 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AC004129.2-201ENST00000457229 287 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 RN7SL174P-201ENST00000475578 289 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms