Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 Y_RNA.555-201ENST00000384673 110 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 RN7SKP129-201ENST00000410288 299 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AC093151.1-201ENST00000427711 313 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 LSM3P3-201ENST00000436601 306 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 SETP5-201ENST00000437270 562 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 ATP6V1E1P1-201ENST00000439215 681 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 GAPDHP23-201ENST00000444823 993 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 MED28P7-201ENST00000456611 530 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AC066616.1-201ENST00000486795 413 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AC015911.1-201ENST00000495111 156 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AC008967.1-201ENST00000504843 163 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 RNU6-976P-201ENST00000516086 111 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 KCTD9P6-201ENST00000522306 950 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 CKS1BP3-201ENST00000600888 237 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AL731566.2-201ENST00000618971 317 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 AL121985.2-201ENST00000621192 555 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 ASNSP3-201ENST00000451989 1306 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 CDR1-202ENST00000625883 1485 ntBASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 RNU6-774P-201ENST00000363238 107 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 RNU6-1158P-201ENST00000391167 107 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AL161909.1-201ENST00000397390 712 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 RPL7P25-201ENST00000404151 721 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 GAPDHP42-201ENST00000406848 981 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 RN7SKP117-201ENST00000410175 264 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 RBM22P7-201ENST00000421321 280 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 BMS1P19-201ENST00000433925 393 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AC009237.4-201ENST00000441078 238 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 RPLP0P1-201ENST00000457002 361 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AC078785.3-201ENST00000476607 425 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AC112204.1-201ENST00000502591 103 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AC146944.3-201ENST00000509969 371 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 SNORA25.10-201ENST00000515926 124 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 IGKV1D-32-201ENST00000517449 318 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AC008429.4-201ENST00000521201 182 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 IGHVII-49-1-201ENST00000521760 224 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AC011611.6-201ENST00000547483 255 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AC011626.1-201ENST00000604710 562 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AC008966.2-201ENST00000606157 453 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AC122710.3-201ENST00000606566 541 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 uc_338.15-201ENST00000615470 191 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 AC024023.1-201ENST00000624530 922 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 SAMMSON-210ENST00000641260 1308 ntBASIC9.44□□□□□ -0.9
TRIM35Q9UPQ4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms