Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC024587.1-201ENST00000505925 2157 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 RNU1-134P-201ENST00000362935 165 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 RNA5SP514-201ENST00000363717 111 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 FABP12P1-201ENST00000401911 322 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC098592.1-201ENST00000419352 333 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 RPS15AP30-201ENST00000420976 390 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 RPL24P2-201ENST00000421023 475 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC004074.1-201ENST00000421810 1063 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 OR5AW1P-201ENST00000426334 1006 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 KCTD9P1-201ENST00000430462 1167 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 FTLP19-201ENST00000433300 394 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC007679.3-201ENST00000434035 414 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC023141.3-201ENST00000436698 278 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 MTCO2P16-201ENST00000436962 677 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 MTCYBP34-201ENST00000439552 670 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 CALM1P2-201ENST00000452941 448 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC112187.1-201ENST00000455837 479 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC090651.1-201ENST00000567865 634 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC002310.3-201ENST00000569728 723 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC012213.3-201ENST00000577199 777 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 RNU4ATAC-201ENST00000580972 127 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AP001542.2-201ENST00000593141 364 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 VN1R90P-201ENST00000595717 726 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 DEFB131E-202ENST00000602581 683 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AP000811.1-201ENST00000603803 651 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC092681.3-201ENST00000609463 678 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC090246.1-201ENST00000616499 426 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC096861.1-201ENST00000616652 240 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 AC073592.6-201ENST00000624271 415 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 KARSP3-201ENST00000571212 1504 ntBASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 GNG5P2-201ENST00000372054 207 ntBASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 SNORA51.9-201ENST00000384295 124 ntBASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 RNU6-1263P-201ENST00000384601 106 ntBASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 Y_RNA.619-201ENST00000410951 90 ntBASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 AL096829.1-201ENST00000413677 457 ntBASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 VTA1P1-201ENST00000414044 866 ntBASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 RPL12P12-201ENST00000424633 501 ntBASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 DEFA9P-201ENST00000433042 285 ntBASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 AC129850.1-201ENST00000436203 508 ntBASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 RPL35AP19-201ENST00000469425 329 ntBASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 AC080014.1-201ENST00000496877 1201 ntBASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 RN7SKP35-201ENST00000517210 151 ntBASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 AC011853.1-201ENST00000518911 454 ntBASIC6.29□□□□□ -1.4
PPARGC1AQ9UBK2 IGKV3D-25-201ENST00000519599 235 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms