Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 TRBV5-2-201ENST00000489095 273 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 DUTP1-201ENST00000493631 470 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 MTND4LP2-201ENST00000502312 285 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 HIGD1AP14-201ENST00000507617 282 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 RN7SKP253-201ENST00000516424 309 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 NDUFS5P6-201ENST00000529136 295 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 OR10G5P-201ENST00000532733 358 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC087897.1-201ENST00000550134 156 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 AL049779.2-201ENST00000553847 315 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 OR4U1P-201ENST00000554958 912 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 AL163952.1-202ENST00000569625 600 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 CCDC58P3-201ENST00000590792 430 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 AL118522.2-201ENST00000616045 615 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC011330.2-201ENST00000621680 635 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC019226.2-201ENST00000625973 424 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 FRG1EP-201ENST00000634469 770 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC119674.1-212ENST00000641155 993 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC139713.2-210ENST00000641741 992 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 AL137141.1-201ENST00000624622 4836 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC068769.1-201ENST00000474767 2426 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 SNORD1C-201ENST00000363315 78 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 RNU6-729P-201ENST00000384399 107 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 MIR142-201ENST00000384835 87 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 AL603865.2-201ENST00000401679 213 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 RPL35AP24-201ENST00000413846 330 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 RPL7L1P9-201ENST00000431298 745 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC084290.1-201ENST00000434995 374 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 GAPDHP58-201ENST00000438477 1006 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 PTMAP6-201ENST00000439110 327 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 RPS27AP16-201ENST00000492222 470 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC008837.1-201ENST00000511513 412 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC119751.5-201ENST00000514077 770 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 RNU6-1004P-201ENST00000516584 111 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 HAUS8P1-201ENST00000549005 542 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 MTND3P12-201ENST00000559068 328 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 MIR4311-201ENST00000580794 100 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.36□□□□□ -1.39
VTA1Q9NP79 RN7SL622P-201ENST00000585292 275 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC245036.5-201ENST00000596330 847 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 DUXAP3-201ENST00000603616 594 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 NANOGP3-201ENST00000605855 286 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC011472.4-201ENST00000615848 491 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 OR8G7P-201ENST00000616658 848 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC037198.3-201ENST00000616754 526 ntBASIC6.36□□□□□ -1.39
VTA1Q9NP79 AC073569.3-201ENST00000619055 682 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms