Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AC005261.4-201ENST00000600047 1385 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 TCP11X1-202ENST00000622971 1372 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 SPRR2C-201ENST00000290702 219 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 MIR383-201ENST00000362257 73 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 ARAFP2-201ENST00000440565 559 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AC068522.1-201ENST00000482895 345 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 NPM1P41-201ENST00000512920 831 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AC010547.7-201ENST00000570323 333 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 BX005214.3-202ENST00000619809 325 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AC140479.6-201ENST00000633535 357 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AC012442.3-202ENST00000636742 206 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AC110716.2-201ENST00000563865 3945 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AC016251.2-201ENST00000623393 3089 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 RNU1-24P-201ENST00000364285 165 ntBASIC4.59□□□□□ -1.68
CHD8Q9HCK8 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 AL353626.3-201ENST00000413399 657 ntBASIC4.59□□□□□ -1.68
CHD8Q9HCK8 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 AC020779.1-201ENST00000478757 796 ntBASIC4.59□□□□□ -1.68
CHD8Q9HCK8 RN7SL810P-201ENST00000493031 276 ntBASIC4.59□□□□□ -1.68
CHD8Q9HCK8 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 AC084783.1-201ENST00000565846 910 ntBASIC4.59□□□□□ -1.68
CHD8Q9HCK8 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.59□□□□□ -1.68
CHD8Q9HCK8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 AL034549.2-201ENST00000618285 3373 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 SNORA48.4-201ENST00000391089 134 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 RNGTTP1-201ENST00000420965 728 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 FABP7P1-201ENST00000424004 391 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 RPL6P9-201ENST00000466502 859 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 AC021074.2-201ENST00000468434 172 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 RPL21P126-201ENST00000470049 478 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 RN7SL132P-201ENST00000478131 296 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 RPS17P5-201ENST00000498293 408 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 MIR5195-201ENST00000583555 115 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 AC007389.2-201ENST00000434630 306 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 AL162591.2-201ENST00000449634 317 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 AC116533.1-201ENST00000459748 321 ntBASIC4.58□□□□□ -1.68
CHD8Q9HCK8 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC4.58□□□□□ -1.68
CHD8Q9HCK8 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms