Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 RPS4XP9-201ENST00000405151 780 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 OR2AH1P-201ENST00000425717 928 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 GTF3AP5-201ENST00000442645 697 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 AL389915.2-201ENST00000454576 441 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 RN7SL738P-201ENST00000470264 297 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 RN7SL205P-201ENST00000490174 284 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 AC069304.1-201ENST00000491593 704 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 BRD9P1-201ENST00000529855 560 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 RN7SL52P-201ENST00000584271 284 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 EIF1P5-201ENST00000585002 234 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 TAS2R6P-201ENST00000605022 826 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 AL627230.1-201ENST00000613077 211 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 AL591926.8-201ENST00000616876 211 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 RN7SL722P-201ENST00000617780 284 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 RN7SL565P-201ENST00000618246 284 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 AL353662.3-201ENST00000625131 237 ntBASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 AC025574.1-201ENST00000554784 1653 ntBASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 SNORA73.1-201ENST00000363107 205 ntBASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 RN7SL346P-201ENST00000491561 294 ntBASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 AC023424.1-201ENST00000496058 459 ntBASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 AC026688.1-201ENST00000520639 1168 ntBASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 AL049830.4-201ENST00000555149 351 ntBASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 AC009643.2-201ENST00000603543 1448 ntBASIC5.91□□□□□ -1.46
UPF3BQ9BZI7 ICE2P1-201ENST00000512800 1849 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 AC099654.3-201ENST00000447087 1546 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 SNURFL-201ENST00000309296 343 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 NACAP7-201ENST00000407371 609 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 KNOP1P3-201ENST00000446933 426 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 AL354714.3-201ENST00000447284 493 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 HMGN2P25-201ENST00000486956 268 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 RPS26P24-201ENST00000497656 331 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 HMGB3P16-201ENST00000508037 287 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 ENPP7P9-201ENST00000514456 627 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 RNA5SP43-201ENST00000516559 110 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 AC079075.1-201ENST00000559543 878 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 AC104687.2-201ENST00000604442 342 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 FAM25E-202ENST00000608562 189 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 AC087821.1-201ENST00000623639 567 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 AC073869.7-201ENST00000640874 297 ntBASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
UPF3BQ9BZI7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.9□□□□□ -1.47
UPF3BQ9BZI7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
UPF3BQ9BZI7 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
UPF3BQ9BZI7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
UPF3BQ9BZI7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
UPF3BQ9BZI7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPF3BQ9BZI7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms