Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 AL137845.2-201ENST00000444292 988 ntBASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 IGHV5-78-201ENST00000450948 295 ntBASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 RN7SL205P-201ENST00000490174 284 ntBASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 RN7SL52P-201ENST00000584271 284 ntBASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 RN7SL722P-201ENST00000617780 284 ntBASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 RN7SL565P-201ENST00000618246 284 ntBASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPAP1Q9BWH6 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 AC091180.1-201ENST00000462104 372 ntBASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 RPL5P22-201ENST00000480199 884 ntBASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 AGGF1P9-201ENST00000561884 913 ntBASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 AC008745.1-201ENST00000604064 271 ntBASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RPAP1Q9BWH6 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.02□□□□□ -1.44
RPAP1Q9BWH6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
RPAP1Q9BWH6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AC011447.7-201ENST00000624228 1590 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 RNA5SP505-201ENST00000364748 108 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AL356967.1-201ENST00000406305 431 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AC119751.6-201ENST00000416712 186 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AC092570.3-201ENST00000420113 693 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AL359265.2-201ENST00000434367 631 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 MRPL35P2-201ENST00000448009 511 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 OR52J1P-201ENST00000450596 932 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 USP9YP2-201ENST00000504503 1000 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AC010350.1-201ENST00000504908 231 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 PRELID3BP5-201ENST00000508612 460 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 USP9YP1-201ENST00000513521 1002 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 RNA5SP392-201ENST00000516905 112 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 RAB9BP1-201ENST00000519581 626 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 MIR5096-201ENST00000583713 70 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AC068790.4-201ENST00000602474 263 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AL512782.1-201ENST00000603093 364 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 AC005377.1-201ENST00000605126 456 ntBASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RPAP1Q9BWH6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms