Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC022106.2-201ENST00000620114 757 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 AC022031.1-201ENST00000585985 2593 ntBASIC7.78□□□□□ -1.16
PHOX2BQ99453 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
PHOX2BQ99453 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PHOX2BQ99453 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
PHOX2BQ99453 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
PHOX2BQ99453 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC7.77□□□□□ -1.16
PHOX2BQ99453 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AC006020.1-201ENST00000420179 1854 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AL049780.3-201ENST00000624612 1583 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 IL15-207ENST00000514653 1388 ntTSL 5 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 RN7SKP6-201ENST00000364795 319 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 MIR146B-201ENST00000365699 73 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AC117470.1-201ENST00000381974 330 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 Y_RNA.395-201ENST00000383945 109 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AL033519.1-201ENST00000407266 307 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 RPL21P107-201ENST00000411449 460 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 TPMTP2-201ENST00000414372 726 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 RBMY2GP-201ENST00000418671 1034 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 DUTP6-201ENST00000425573 462 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 RBMY2NP-201ENST00000434454 1028 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 MORF4-201ENST00000447135 971 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 RN7SL861P-201ENST00000473793 285 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 AL163973.1-201ENST00000484753 577 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 RPL29P23-201ENST00000486188 442 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AP001025.2-201ENST00000490908 477 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AC108120.1-201ENST00000506543 991 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 SNORA25.17-201ENST00000517184 124 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 HSPE1P2-201ENST00000554777 306 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AC010323.2-201ENST00000596405 594 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 AC021646.1-201ENST00000605469 484 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 OR1N1-202ENST00000619659 939 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AC119674.1-207ENST00000641355 633 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AC005034.3-201ENST00000604845 1747 ntBASIC7.77□□□□□ -1.17
PHOX2BQ99453 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PHOX2BQ99453 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.77□□□□□ -1.17
PHOX2BQ99453 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
PHOX2BQ99453 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.76□□□□□ -1.17
PHOX2BQ99453 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
PHOX2BQ99453 AC016251.1-201ENST00000624299 4198 ntBASIC7.76□□□□□ -1.17
PHOX2BQ99453 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
PHOX2BQ99453 AC020978.6-201ENST00000571197 3177 ntBASIC7.76□□□□□ -1.17
PHOX2BQ99453 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
PHOX2BQ99453 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
PHOX2BQ99453 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
PHOX2BQ99453 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PHOX2BQ99453 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PHOX2BQ99453 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PHOX2BQ99453 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
PHOX2BQ99453 RNU6-1318P-201ENST00000365389 103 ntBASIC7.76□□□□□ -1.17
PHOX2BQ99453 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
PHOX2BQ99453 SSX6-201ENST00000376932 562 ntBASIC7.76□□□□□ -1.17
PHOX2BQ99453 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
PHOX2BQ99453 RNU6-952P-201ENST00000391164 108 ntBASIC7.76□□□□□ -1.17
PHOX2BQ99453 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.76□□□□□ -1.17
PHOX2BQ99453 RNU2-9P-201ENST00000410194 145 ntBASIC7.76□□□□□ -1.17
PHOX2BQ99453 AC245054.2-201ENST00000415639 319 ntBASIC7.76□□□□□ -1.17
PHOX2BQ99453 AC234782.4-201ENST00000417646 1048 ntBASIC7.76□□□□□ -1.17
PHOX2BQ99453 AC006509.1-201ENST00000420788 634 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms