Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.92□□□□□ -1.14
IFT140Q96RY7 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
IFT140Q96RY7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
IFT140Q96RY7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
IFT140Q96RY7 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
IFT140Q96RY7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
IFT140Q96RY7 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
IFT140Q96RY7 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
IFT140Q96RY7 AC068733.2-201ENST00000605434 1418 ntBASIC7.92□□□□□ -1.14
IFT140Q96RY7 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.92□□□□□ -1.14
IFT140Q96RY7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
IFT140Q96RY7 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
IFT140Q96RY7 AL590762.2-201ENST00000395798 571 ntBASIC7.92□□□□□ -1.14
IFT140Q96RY7 AC011933.1-201ENST00000413334 321 ntBASIC7.92□□□□□ -1.14
IFT140Q96RY7 FTH1P16-201ENST00000435241 552 ntBASIC7.92□□□□□ -1.14
IFT140Q96RY7 AC116533.1-201ENST00000459748 321 ntBASIC7.92□□□□□ -1.14
IFT140Q96RY7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC7.92□□□□□ -1.14
IFT140Q96RY7 BX005214.3-202ENST00000619809 325 ntBASIC7.92□□□□□ -1.14
IFT140Q96RY7 AC243960.7-201ENST00000623532 707 ntBASIC7.92□□□□□ -1.14
IFT140Q96RY7 AL161912.2-201ENST00000565707 3007 ntBASIC7.92□□□□□ -1.14
IFT140Q96RY7 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
IFT140Q96RY7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
IFT140Q96RY7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.92□□□□□ -1.14
IFT140Q96RY7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
IFT140Q96RY7 AC025031.4-201ENST00000621248 3271 ntBASIC7.92□□□□□ -1.14
IFT140Q96RY7 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
IFT140Q96RY7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
IFT140Q96RY7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
IFT140Q96RY7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
IFT140Q96RY7 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
IFT140Q96RY7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
IFT140Q96RY7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC7.91□□□□□ -1.14
IFT140Q96RY7 RPS17P8-201ENST00000434525 335 ntBASIC7.91□□□□□ -1.14
IFT140Q96RY7 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.91□□□□□ -1.14
IFT140Q96RY7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC7.91□□□□□ -1.14
IFT140Q96RY7 AC041039.1-201ENST00000485656 536 ntBASIC7.91□□□□□ -1.14
IFT140Q96RY7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
IFT140Q96RY7 AC010476.1-201ENST00000519111 851 ntBASIC7.91□□□□□ -1.14
IFT140Q96RY7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC7.91□□□□□ -1.14
IFT140Q96RY7 PSMB7P1-201ENST00000556349 514 ntBASIC7.91□□□□□ -1.14
IFT140Q96RY7 AC116553.2-201ENST00000564203 463 ntBASIC7.91□□□□□ -1.14
IFT140Q96RY7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC7.91□□□□□ -1.14
IFT140Q96RY7 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC7.91□□□□□ -1.14
IFT140Q96RY7 MIR6075-201ENST00000620782 95 ntBASIC7.91□□□□□ -1.14
IFT140Q96RY7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
IFT140Q96RY7 ERVFRD-3-201ENST00000578561 1617 ntBASIC7.91□□□□□ -1.14
IFT140Q96RY7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
IFT140Q96RY7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC7.91□□□□□ -1.14
IFT140Q96RY7 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
IFT140Q96RY7 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
IFT140Q96RY7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
IFT140Q96RY7 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
IFT140Q96RY7 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
IFT140Q96RY7 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
IFT140Q96RY7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
IFT140Q96RY7 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC7.9□□□□□ -1.14
IFT140Q96RY7 AL137141.1-201ENST00000624622 4836 ntBASIC7.9□□□□□ -1.14
IFT140Q96RY7 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.9□□□□□ -1.14
IFT140Q96RY7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.9□□□□□ -1.14
IFT140Q96RY7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.9□□□□□ -1.14
IFT140Q96RY7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC7.9□□□□□ -1.14
IFT140Q96RY7 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
IFT140Q96RY7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.9□□□□□ -1.14
IFT140Q96RY7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
IFT140Q96RY7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
IFT140Q96RY7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
IFT140Q96RY7 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
IFT140Q96RY7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
IFT140Q96RY7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.9□□□□□ -1.15
IFT140Q96RY7 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.9□□□□□ -1.15
IFT140Q96RY7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.89□□□□□ -1.15
IFT140Q96RY7 SPRR2C-201ENST00000290702 219 ntBASIC7.89□□□□□ -1.15
IFT140Q96RY7 TMSB10P2-201ENST00000416049 131 ntBASIC7.89□□□□□ -1.15
IFT140Q96RY7 SCARNA10-201ENST00000459255 330 ntBASIC7.89□□□□□ -1.15
IFT140Q96RY7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC7.89□□□□□ -1.15
IFT140Q96RY7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.89□□□□□ -1.15
IFT140Q96RY7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC7.89□□□□□ -1.15
IFT140Q96RY7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.89□□□□□ -1.15
IFT140Q96RY7 MIR3653-201ENST00000625572 110 ntBASIC7.89□□□□□ -1.15
IFT140Q96RY7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.89□□□□□ -1.15
IFT140Q96RY7 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
IFT140Q96RY7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
IFT140Q96RY7 AC016251.2-201ENST00000623393 3089 ntBASIC7.89□□□□□ -1.15
IFT140Q96RY7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
IFT140Q96RY7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
IFT140Q96RY7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
IFT140Q96RY7 UQCRC2P1-201ENST00000417777 1332 ntBASIC7.89□□□□□ -1.15
IFT140Q96RY7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.88□□□□□ -1.15
IFT140Q96RY7 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
IFT140Q96RY7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
IFT140Q96RY7 AC021146.4-201ENST00000309229 279 ntBASIC7.88□□□□□ -1.15
IFT140Q96RY7 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC7.88□□□□□ -1.15
IFT140Q96RY7 AL590399.2-201ENST00000427536 309 ntBASIC7.88□□□□□ -1.15
IFT140Q96RY7 RPL23AP83-201ENST00000434984 473 ntBASIC7.88□□□□□ -1.15
IFT140Q96RY7 AC105137.1-201ENST00000484355 562 ntBASIC7.88□□□□□ -1.15
IFT140Q96RY7 RN7SL558P-201ENST00000497468 299 ntBASIC7.88□□□□□ -1.15
IFT140Q96RY7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.88□□□□□ -1.15
IFT140Q96RY7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
IFT140Q96RY7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC7.88□□□□□ -1.15
IFT140Q96RY7 RN7SL176P-201ENST00000580352 264 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms