Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DDX18P6-201ENST00000450119 1997 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 ZNF876P-202ENST00000398732 1485 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNX18Q96RF0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX18Q96RF0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNX18Q96RF0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX18Q96RF0 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC245100.2-201ENST00000454544 1679 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNX18Q96RF0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX18Q96RF0 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 MIR323B-201ENST00000385269 82 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC004386.1-201ENST00000393214 761 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 MCTS2P-201ENST00000394552 546 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 RPL11P3-201ENST00000395256 523 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC092638.1-201ENST00000411966 1275 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 MTND4P3-201ENST00000417829 541 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 HMGB1P49-201ENST00000418882 569 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 MTND2P18-201ENST00000419962 1030 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 FTLP8-201ENST00000446770 267 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC239798.3-201ENST00000454459 408 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 COX6B1P2-201ENST00000489624 230 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 RBM22P1-201ENST00000578589 1214 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC015726.1-201ENST00000602353 681 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC108865.2-201ENST00000606881 432 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 AP004607.9-201ENST00000618202 316 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC123767.1-202ENST00000620407 817 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC019072.1-201ENST00000604535 1551 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 LYARP1-201ENST00000436977 1501 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 AC120338.1-201ENST00000625074 1541 ntBASIC5.32□□□□□ -1.56
SNX18Q96RF0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX18Q96RF0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX18Q96RF0 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNX18Q96RF0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SNX18Q96RF0 MTCO1P18-201ENST00000455518 1419 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC093225.1-201ENST00000506867 1408 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 RN7SKP275-201ENST00000364626 301 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 MT-TP-201ENST00000387461 68 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 Y_RNA.578-201ENST00000390903 88 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 RNU6-932P-201ENST00000391108 106 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX18Q96RF0 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 AL513175.2-201ENST00000422071 443 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 RPS4XP16-201ENST00000427198 791 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 FO393419.3-201ENST00000428741 282 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX18Q96RF0 AC084290.1-201ENST00000434995 374 ntBASIC5.31□□□□□ -1.56
SNX18Q96RF0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms