Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 MIR8069-1-201ENST00000616627 86 ntBASIC5.11□□□□□ -1.59
C9orf72Q96LT7 AC090510.2-201ENST00000617465 629 ntBASIC5.11□□□□□ -1.59
C9orf72Q96LT7 MIR8069-2-201ENST00000621412 86 ntBASIC5.11□□□□□ -1.59
C9orf72Q96LT7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 LINC01739-205ENST00000641890 573 ntBASIC5.11□□□□□ -1.59
C9orf72Q96LT7 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.11□□□□□ -1.59
C9orf72Q96LT7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.11□□□□□ -1.59
C9orf72Q96LT7 HSPA8P18-201ENST00000439846 1928 ntBASIC5.11□□□□□ -1.59
C9orf72Q96LT7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 PCAT14-202ENST00000627127 3935 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AL359643.1-201ENST00000404109 423 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 OTX2P1-201ENST00000450956 354 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 HMGB1P4-201ENST00000455362 567 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AC104849.1-201ENST00000462623 405 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AC009127.1-201ENST00000467090 155 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 RN7SL97P-201ENST00000486780 299 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AC138938.1-201ENST00000515431 782 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AL671862.1-201ENST00000515851 349 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 RN7SKP66-201ENST00000516681 231 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 KCTD9P6-201ENST00000522306 950 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AC134349.2-201ENST00000535136 910 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AC004948.1-201ENST00000609858 672 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AC015660.5-201ENST00000623238 564 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AC104260.2-201ENST00000623551 3497 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 AP002799.1-201ENST00000623552 423 ntBASIC5.1□□□□□ -1.59
C9orf72Q96LT7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.1□□□□□ -1.59
C9orf72Q96LT7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 RN7SKP74-201ENST00000362849 309 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AL353625.1-202ENST00000366273 571 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AL645733.1-201ENST00000402250 217 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 NUDT19P3-201ENST00000404698 555 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 SNORA77-201ENST00000408716 125 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 RN7SKP125-201ENST00000410481 302 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 RPSAP41-201ENST00000439695 860 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 RPL12P3-201ENST00000440080 396 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AL031584.1-201ENST00000447169 754 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 RHEBP2-201ENST00000450289 600 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 OR2A3P-201ENST00000493774 953 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AC012339.2-201ENST00000523996 453 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AP000859.1-201ENST00000525536 307 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 OR10D4P-201ENST00000525892 951 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms