Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNU6-615P-201ENST00000516065 106 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AL049830.4-201ENST00000555149 351 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC145350.1-201ENST00000567426 208 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 MTND3P13-201ENST00000574391 343 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC067838.1-201ENST00000606064 577 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 FAM72A-208ENST00000607379 1139 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 PART1_2.1-201ENST00000612397 250 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC105105.5-201ENST00000622635 1294 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AP002967.1-201ENST00000624203 539 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC073593.1-201ENST00000624500 411 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.65□□□□□ -1.51
ATG4AQ8WYN0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ATG4AQ8WYN0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ATG4AQ8WYN0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ATG4AQ8WYN0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ATG4AQ8WYN0 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.65□□□□□ -1.51
ATG4AQ8WYN0 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ATG4AQ8WYN0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
ATG4AQ8WYN0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ATG4AQ8WYN0 AC114786.1-201ENST00000512892 1415 ntBASIC5.65□□□□□ -1.51
ATG4AQ8WYN0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ATG4AQ8WYN0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AP005435.3-201ENST00000531260 3198 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AC002525.1-201ENST00000624392 1622 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 RNU5B-1-201ENST00000363286 116 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 SNORA16A-201ENST00000384342 137 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 RNA5SP187-201ENST00000384400 119 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 LYPLA1P3-201ENST00000402650 695 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 RNU4-74P-201ENST00000411280 161 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 MTCYBP7-201ENST00000419540 1134 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 GAPDHP34-201ENST00000432112 823 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AC069540.1-201ENST00000446320 988 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 MTND6P5-201ENST00000448266 512 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 RPL21P131-201ENST00000497298 483 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AC093752.1-206ENST00000511823 336 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 OR7E128P-201ENST00000532736 1024 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AP001804.2-201ENST00000533932 910 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 MRPS21P7-201ENST00000566937 238 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AC129915.3-201ENST00000634128 948 ntBASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
ATG4AQ8WYN0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 AL022311.1-201ENST00000623726 19416 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 OR52B3P-201ENST00000314715 928 ntBASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4AQ8WYN0 MIR513B-201ENST00000385136 84 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms