Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC104297.1-201ENST00000393779 870 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 DEFB130D-201ENST00000426866 237 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC114973.1-201ENST00000429057 632 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 RPS3AP38-201ENST00000435889 763 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AL590399.4-201ENST00000436561 601 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 MRPS21P3-201ENST00000436696 262 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC104164.3-201ENST00000467363 1258 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC008427.1-201ENST00000503102 655 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 SUMO2P5-201ENST00000506790 245 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 SCARNA16.4-201ENST00000516956 187 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC010376.1-201ENST00000522101 334 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC118942.1-201ENST00000529674 1035 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AP000919.1-202ENST00000581139 1264 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AP002802.2-201ENST00000605877 235 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 OR7A19P-201ENST00000608051 733 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC018628.1-201ENST00000624147 3819 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AC011933.2-201ENST00000578539 2790 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 RNU5B-4P-201ENST00000363508 111 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 RNU6-244P-201ENST00000391028 104 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AC023128.2-201ENST00000420880 1223 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 SRSF1P1-201ENST00000424058 520 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 MTCO2P17-201ENST00000424336 677 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 GSTM5P1-201ENST00000434751 660 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 Z80107.1-201ENST00000436830 412 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 RN7SL97P-201ENST00000486780 299 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 UBE2V1P12-201ENST00000503954 474 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 RNU6-941P-201ENST00000516346 108 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 PMS2P3-207ENST00000529061 717 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 HNRNPCP1-201ENST00000556181 766 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AL163952.1-202ENST00000569625 600 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AP005403.1-201ENST00000579720 229 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 MIR4646-201ENST00000580775 63 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 MIR4436B2-201ENST00000581415 91 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 MIR4436B1-201ENST00000583272 91 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AC012254.4-201ENST00000588843 273 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AC006115.2-201ENST00000596823 202 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AC079610.2-201ENST00000604818 690 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AC018754.1-201ENST00000607486 925 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AC074101.1-201ENST00000637861 241 ntBASIC5.53□□□□□ -1.52
HMGB4Q8WW32 AC119674.1-212ENST00000641155 993 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms