Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 AC010487.1-201ENST00000594408 1172 ntBASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 AC020915.5-201ENST00000596836 964 ntBASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 AC087783.2-201ENST00000605070 562 ntBASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 AL139124.1-201ENST00000609123 421 ntBASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 AC244107.2-201ENST00000611773 76 ntBASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 AP003400.3-201ENST00000624904 346 ntBASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 INTS6P1-201ENST00000504674 2530 ntBASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 AC110792.3-201ENST00000595906 1614 ntBASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDDC3Q8N4P3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 MIR192-201ENST00000384915 110 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AC099670.2-201ENST00000435130 321 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AC093716.1-201ENST00000435923 377 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 SCAND3P1-201ENST00000439854 1060 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AL035551.1-201ENST00000446931 348 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AL157884.3-201ENST00000448273 1184 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AC092647.2-201ENST00000452998 253 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 NDUFA5P9-201ENST00000472609 340 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AC093827.1-201ENST00000480094 861 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 IMPA1P1-201ENST00000510718 842 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AL671862.1-201ENST00000515851 349 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 OR4A17P-201ENST00000526032 904 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 OR5AZ1P-201ENST00000527448 943 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AC063949.1-201ENST00000552900 865 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AC132825.1-201ENST00000463573 2247 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 ADAM24P-201ENST00000398655 2101 ntBASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HDDC3Q8N4P3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 VTI1BP4-201ENST00000427516 527 ntBASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 AC138761.5-201ENST00000433967 325 ntBASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 NPM1P18-201ENST00000434232 732 ntBASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 MTND2P2-201ENST00000434633 945 ntBASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 NDUFB4P8-201ENST00000435351 367 ntBASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 GSTA7P-201ENST00000438425 448 ntBASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.28□□□□□ -1.56
HDDC3Q8N4P3 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms