Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL050343.2-201ENST00000607338 280 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 RN7SL3-201ENST00000610674 299 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 YWHAEP7-203ENST00000622054 312 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC079456.1-201ENST00000624010 480 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 CKAP2P1-201ENST00000555477 2049 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 AP002907.1-201ENST00000606361 1430 ntBASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.99□□□□□ -1.29
DEPDC4Q8N2C3 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC011008.2-201ENST00000624866 3352 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AP000473.2-201ENST00000602659 1537 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 OR52B1P-201ENST00000316506 909 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 SNORA51.2-201ENST00000364595 132 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 RNU6-282P-201ENST00000365357 103 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AMELY-202ENST00000383036 621 ntTSL 5 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 RPL23AP32-201ENST00000395315 459 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 MRPL42P2-201ENST00000403169 426 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 TPMTP2-201ENST00000414372 726 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 SNRPFP1-201ENST00000414761 252 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 OR4F2P-201ENST00000424047 938 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 RPL35P8-201ENST00000433284 337 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 ATP5HP2-201ENST00000433885 485 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 RPS3AP38-201ENST00000435889 763 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 HMGB1P7-201ENST00000450921 612 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 RPL7AP52-201ENST00000458096 790 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC026410.2-201ENST00000460281 156 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC090142.1-201ENST00000465776 462 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AL355076.1-201ENST00000484315 270 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 GAPDHP38-201ENST00000503632 1002 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 EIF3KP3-201ENST00000514461 639 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 MTND6P19-201ENST00000519399 524 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 HMGB1P42-201ENST00000532126 553 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 SUB1P2-201ENST00000556401 297 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC055876.1-202ENST00000567053 138 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 ANP32BP1-202ENST00000568553 737 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 DTNA-220ENST00000590831 847 ntTSL 2 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC140658.6-201ENST00000603958 201 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AP001836.1-201ENST00000604675 523 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AL445222.1-201ENST00000607259 628 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AL132765.2-201ENST00000610812 351 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC068722.2-201ENST00000618734 544 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AC138649.5-201ENST00000637456 137 ntBASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
DEPDC4Q8N2C3 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms