Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 OR4G2P-201ENST00000328113 903 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 NACA3P-201ENST00000359690 648 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 U3.4-201ENST00000363352 213 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 Y_RNA.303-201ENST00000364998 94 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 Y_RNA.359-201ENST00000365498 102 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 U3.25-201ENST00000391209 220 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AL023284.3-201ENST00000407767 334 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 SNORA11-201ENST00000408789 128 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 U3.43-201ENST00000410734 213 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 RNU6-920P-201ENST00000410926 92 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 HMGN1P14-201ENST00000412459 517 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AP000534.2-201ENST00000412729 568 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 RPS7P8-201ENST00000418311 581 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 RPL35AP31-201ENST00000418340 337 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AL035660.1-201ENST00000422041 222 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 PNRC2P1-201ENST00000423940 420 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 RAC1P8-201ENST00000427086 527 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 RPS4XP16-201ENST00000427198 791 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 BX323845.3-201ENST00000428215 527 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 VN1R54P-201ENST00000435210 1049 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AC064862.4-201ENST00000442180 334 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 HMGB1P48-201ENST00000446155 598 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 FTLP8-201ENST00000446770 267 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 MORF4-201ENST00000447135 971 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 RAB28P3-201ENST00000448325 597 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 BUD31P2-201ENST00000449374 300 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 RPSAP39-201ENST00000467439 883 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 OR4G11P-201ENST00000492842 939 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AC112198.1-201ENST00000505369 1220 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 GTF2F2P1-201ENST00000511083 675 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 SUMO2P7-201ENST00000511179 285 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 SCARNA18.1-201ENST00000516330 83 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 NPM1P5-201ENST00000557228 838 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 BNIP3P33-201ENST00000598912 569 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AC096553.1-201ENST00000605169 829 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AC091946.2-201ENST00000606105 291 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 MIR6793-201ENST00000612376 63 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AC092794.2-201ENST00000620933 563 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AC092447.7-201ENST00000422212 1621 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AL117339.4-201ENST00000608335 7063 ntBASIC6.17□□□□□ -1.42
TMEFF1Q8IYR6 AL359715.4-201ENST00000606629 1436 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 AC010329.1-201ENST00000593903 8328 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 SHQ1P1-201ENST00000437111 1544 ntBASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TMEFF1Q8IYR6 RNA5SP514-201ENST00000363717 111 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms