Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC3.6□□□□□ -1.83
CKS1BP61024 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC3.6□□□□□ -1.83
CKS1BP61024 AC239809.1-201ENST00000450470 217 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 FABP3P2-201ENST00000453169 399 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 CLIC4P1-201ENST00000453177 535 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 AC092045.1-201ENST00000495716 1231 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.6□□□□□ -1.83
CKS1BP61024 AC020593.1-201ENST00000507399 299 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
CKS1BP61024 OR5H7P-201ENST00000514084 930 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 RNA5SP154-201ENST00000516193 111 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 Y_RNA.667-201ENST00000516212 107 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.6□□□□□ -1.83
CKS1BP61024 AP000648.1-201ENST00000529682 397 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 AC079905.1-201ENST00000549280 475 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC3.6□□□□□ -1.83
CKS1BP61024 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC3.6□□□□□ -1.83
CKS1BP61024 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.6□□□□□ -1.83
CKS1BP61024 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC3.6□□□□□ -1.83
CKS1BP61024 RBM22P12-201ENST00000567098 1255 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 AP001496.3-201ENST00000580230 913 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 AC011840.5-201ENST00000582125 771 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC3.6□□□□□ -1.83
CKS1BP61024 VN1R79P-201ENST00000593540 513 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 AL031601.1-201ENST00000605702 394 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC3.6□□□□□ -1.83
CKS1BP61024 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CKS1BP61024 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC3.6□□□□□ -1.83
CKS1BP61024 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.6□□□□□ -1.83
CKS1BP61024 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CKS1BP61024 AL133268.1-201ENST00000405676 1401 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CKS1BP61024 AC092079.1-201ENST00000558620 1985 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC3.6□□□□□ -1.83
CKS1BP61024 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CKS1BP61024 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CKS1BP61024 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CKS1BP61024 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CKS1BP61024 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CKS1BP61024 AC006206.1-201ENST00000544842 3387 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CKS1BP61024 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CKS1BP61024 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CKS1BP61024 AL672167.1-205ENST00000641112 3080 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CKS1BP61024 RNU1-108P-201ENST00000362556 161 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 SNORA62.2-201ENST00000364672 152 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 RN7SKP124-201ENST00000364730 341 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 MRRF-207ENST00000373729 870 ntTSL 3 BASIC3.59□□□□□ -1.83
CKS1BP61024 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CKS1BP61024 SUGT1P2-201ENST00000379452 992 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AL078604.1-201ENST00000404609 466 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 GAPDHP42-201ENST00000406848 981 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 RPS3AP2-201ENST00000407190 754 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 RN7SKP126-201ENST00000411143 300 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CKS1BP61024 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.59□□□□□ -1.83
CKS1BP61024 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC3.59□□□□□ -1.83
CKS1BP61024 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC3.59□□□□□ -1.83
CKS1BP61024 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.59□□□□□ -1.83
CKS1BP61024 BTG3P1-201ENST00000435859 716 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.59□□□□□ -1.83
CKS1BP61024 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.59□□□□□ -1.83
CKS1BP61024 AC090804.1-201ENST00000448870 490 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CKS1BP61024 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC3.59□□□□□ -1.83
CKS1BP61024 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CKS1BP61024 AC100832.1-201ENST00000471945 383 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AC098818.1-201ENST00000478593 252 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 RN7SL205P-201ENST00000490174 284 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AC106822.1-201ENST00000502647 526 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC3.59□□□□□ -1.83
CKS1BP61024 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC3.59□□□□□ -1.83
CKS1BP61024 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.59□□□□□ -1.83
CKS1BP61024 IMPA1P1-201ENST00000510718 842 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AC018797.1-201ENST00000510791 255 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.59□□□□□ -1.83
CKS1BP61024 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC3.59□□□□□ -1.83
CKS1BP61024 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.59□□□□□ -1.83
CKS1BP61024 OR8G3P-201ENST00000533406 921 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AC027369.5-201ENST00000533838 755 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.59□□□□□ -1.83
CKS1BP61024 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.59□□□□□ -1.83
CKS1BP61024 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CKS1BP61024 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC3.59□□□□□ -1.83
CKS1BP61024 AC092121.1-201ENST00000569452 202 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.59□□□□□ -1.83
CKS1BP61024 AL139395.1-201ENST00000603662 160 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AC010680.3-201ENST00000604215 520 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AC020634.1-201ENST00000608701 549 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AC116447.1-201ENST00000613153 453 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AC000123.2-201ENST00000623124 461 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 AP003400.3-201ENST00000624904 346 ntBASIC3.59□□□□□ -1.83
CKS1BP61024 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC3.59□□□□□ -1.83
CKS1BP61024 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms