Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 RNA5SP319-201ENST00000362768 119 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SPCS3P61009 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SPCS3P61009 MIR3074-201ENST00000384885 81 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SPCS3P61009 AC104297.1-201ENST00000393779 870 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.17□□□□□ -1.74
SPCS3P61009 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.17□□□□□ -1.74
SPCS3P61009 EIF4EP1-201ENST00000422311 642 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.17□□□□□ -1.74
SPCS3P61009 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SPCS3P61009 COX6CP13-201ENST00000428703 226 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 RPL12P46-201ENST00000436610 195 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 AC004980.3-201ENST00000447046 365 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.17□□□□□ -1.74
SPCS3P61009 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.17□□□□□ -1.74
SPCS3P61009 AC108161.1-201ENST00000461060 402 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 AC091180.1-201ENST00000462104 372 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 RPL9P15-201ENST00000491096 532 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.17□□□□□ -1.74
SPCS3P61009 AC138866.2-201ENST00000508650 584 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 OR51K1P-201ENST00000510214 950 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 AC006499.4-201ENST00000510947 694 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.17□□□□□ -1.74
SPCS3P61009 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.17□□□□□ -1.74
SPCS3P61009 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.17□□□□□ -1.74
SPCS3P61009 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.17□□□□□ -1.74
SPCS3P61009 HMGB1P40-201ENST00000525121 540 ntBASIC4.17□□□□□ -1.74
SPCS3P61009 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.17□□□□□ -1.74
SPCS3P61009 RBM7-208ENST00000545678 867 ntTSL 3 BASIC4.17□□□□□ -1.74
SPCS3P61009 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.17□□□□□ -1.74
SPCS3P61009 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.17□□□□□ -1.74
SPCS3P61009 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.17□□□□□ -1.74
SPCS3P61009 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.17□□□□□ -1.74
SPCS3P61009 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SPCS3P61009 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.17□□□□□ -1.74
SPCS3P61009 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SPCS3P61009 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.17□□□□□ -1.74
SPCS3P61009 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SPCS3P61009 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
SPCS3P61009 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SPCS3P61009 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 AC139713.2-215ENST00000641428 5037 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 MIR133B-201ENST00000362210 119 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.16□□□□□ -1.74
SPCS3P61009 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SPCS3P61009 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SPCS3P61009 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SPCS3P61009 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.16□□□□□ -1.74
SPCS3P61009 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.16□□□□□ -1.74
SPCS3P61009 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.16□□□□□ -1.74
SPCS3P61009 AL139148.1-201ENST00000427122 680 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.16□□□□□ -1.74
SPCS3P61009 GAPDHP34-201ENST00000432112 823 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 AC002504.1-201ENST00000438281 691 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 RPS29P10-201ENST00000439197 166 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.16□□□□□ -1.74
SPCS3P61009 BTF3P6-201ENST00000448054 499 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 AC104306.1-201ENST00000449702 371 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.16□□□□□ -1.74
SPCS3P61009 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.16□□□□□ -1.74
SPCS3P61009 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.16□□□□□ -1.74
SPCS3P61009 AC104634.1-201ENST00000452720 462 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 IFNWP4-201ENST00000453148 294 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.16□□□□□ -1.74
SPCS3P61009 CYCSP34-201ENST00000458172 304 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 RN7SL447P-201ENST00000494711 245 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 AC092349.1-201ENST00000504903 310 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 RNU6-943P-201ENST00000516960 98 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.16□□□□□ -1.74
SPCS3P61009 IGLVIV-53-201ENST00000520107 367 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.16□□□□□ -1.74
SPCS3P61009 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.16□□□□□ -1.74
SPCS3P61009 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.16□□□□□ -1.74
SPCS3P61009 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.16□□□□□ -1.74
SPCS3P61009 BLZF2P-201ENST00000553776 1130 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.16□□□□□ -1.74
SPCS3P61009 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.16□□□□□ -1.74
SPCS3P61009 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.16□□□□□ -1.74
SPCS3P61009 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SPCS3P61009 AC000068.2-201ENST00000608816 460 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 AC097505.1-201ENST00000610199 565 ntBASIC4.16□□□□□ -1.74
SPCS3P61009 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.16□□□□□ -1.74
SPCS3P61009 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.16□□□□□ -1.74
SPCS3P61009 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.16□□□□□ -1.74
SPCS3P61009 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPCS3P61009 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms